RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 FAM234BA2RU67 622 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 ADAMDEC1O15204 470 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 CXCL13O43927 109 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 COQ9O75208 318 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 KLHL2O95198 593 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 PDYNP01213 254 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 IL32P24001 234 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 NUDT6P53370 316 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 BSPH1Q075Z2 132 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 C17orf67Q0P5P2 114 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 NAB1Q13506 487 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 TSC22D1Q15714 1073 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 DECR1Q16698 335 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 SFRP5Q5T4F7 317 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 GTF2IRD2BQ6EKJ0 949 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 CLEC2AQ6UVW9 174 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 SEZ6L2Q6UXD5 910 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 ATG4DQ86TL0 474 aaPredicted RBP13.32□□□□□ -0.28
SEC13-206ENST00000397102 GTF2IRD2Q86UP8 949 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 FAM9CQ8IZT9 166 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 OR4F6Q8NGB9 312 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 PIWIL2Q8TC59 973 aaKnown RBP13.32□□□□□ -0.28
SEC13-206ENST00000397102 SELENOMQ8WWX9 145 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 EXOSC8Q96B26 276 aaKnown RBP13.32□□□□□ -0.28
SEC13-206ENST00000397102 NSUN5Q96P11 429 aaKnown RBP13.32□□□□□ -0.28
SEC13-206ENST00000397102 GPR78Q96P69 363 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 USB1Q9BQ65 265 aaKnown RBP13.32□□□□□ -0.28
SEC13-206ENST00000397102 GIMAP4Q9NUV9 329 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 CISD1Q9NZ45 108 aaKnown RBP13.32□□□□□ -0.28
SEC13-206ENST00000397102 MCM8Q9UJA3 840 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 VDAC3Q9Y277 283 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 B3GALT5Q9Y2C3 310 aa13.32□□□□□ -0.28
SEC13-206ENST00000397102 FREM1Q5H8C1 2179 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 DPRXA6NFQ7 191 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 ELOA3DA6NLF2 546 aaPredicted RBP13.31□□□□□ -0.28
SEC13-206ENST00000397102 STX16-NPEPL1H3BU86 382 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 CCDC188H7C350 402 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 STX16O14662 325 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 IL33O95760 270 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 IL3P08700 152 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 PYGBP11216 843 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 ELOA3BQ3SY89 546 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 TECRLQ5HYJ1 363 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 CYB5R2Q6BCY4 276 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 TFAP2EQ6VUC0 442 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 ESPNLQ6ZVH7 1005 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 ZNF619Q8N2I2 560 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 ELOA3Q8NG57 546 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 OR2V1Q8NHB1 315 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 ROBO4Q8WZ75 1007 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 PHF21BQ96EK2 531 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 ADAD1Q96M93 576 aaKnown RBP13.31□□□□□ -0.28
SEC13-206ENST00000397102 HBEGFQ99075 208 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 POTEKPQ9BYX7 375 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 TBL1XR1Q9BZK7 514 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 MRTO4Q9UKD2 239 aaKnown RBP13.31□□□□□ -0.28
SEC13-206ENST00000397102 SNX6Q9UNH7 406 aa13.31□□□□□ -0.28
SEC13-206ENST00000397102 ALPK2Q86TB3 2170 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 A0A087WZY1 265 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 A0A096LPK6 155 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 TNFSF11O14788 317 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 WIPF1O43516 503 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 GMFGO60234 142 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 ANGPTL1O95841 491 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 SLC25A16P16260 332 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 ZNF16P17020 682 aaPredicted RBP13.3□□□□□ -0.28
SEC13-206ENST00000397102 SRD5A1P18405 259 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 STX2P32856 288 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 MPIP34949 423 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 PSMD4P55036 377 aaKnown RBP13.3□□□□□ -0.28
SEC13-206ENST00000397102 RAC1P63000 192 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 PRR5P85299 388 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 CALCOCO2Q13137 446 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 PDSS1Q5T2R2 415 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 AGAP6Q5VW22 663 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 GTPBP8Q8N3Z3 284 aaPredicted RBP13.3□□□□□ -0.28
SEC13-206ENST00000397102 KISS1RQ969F8 398 aaPredicted RBP13.3□□□□□ -0.28
SEC13-206ENST00000397102 SHCBP1LQ9BZQ2 653 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 Q9N2J8 555 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 SLC35C2Q9NQQ7 365 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 VPS29Q9UBQ0 182 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 TMCO1Q9UM00 188 aa13.3□□□□□ -0.28
SEC13-206ENST00000397102 A0A087WV62 115 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 A0A0J9YW62 118 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 C7orf72A4D263 438 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 SHISA9B4DS77 424 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 UBFD1O14562 309 aaKnown RBP13.29□□□□□ -0.28
SEC13-206ENST00000397102 LMX1BO60663 402 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 RAMP1O60894 148 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 SLITRK5O94991 958 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 OTCP00480 354 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 OPN1LWP04000 364 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 PABPC4LP0CB38 370 aaKnown RBP13.29□□□□□ -0.28
SEC13-206ENST00000397102 PSMA4P25789 261 aaKnown RBP13.29□□□□□ -0.28
SEC13-206ENST00000397102 CDH11P55287 796 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 C21orf58P58505 322 aa13.29□□□□□ -0.28
SEC13-206ENST00000397102 IRX1P78414 480 aaPredicted RBP13.29□□□□□ -0.28
SEC13-206ENST00000397102 SRSF2Q01130 221 aaKnown RBP13.29□□□□□ -0.28
SEC13-206ENST00000397102 CSTF3Q12996 717 aaKnown RBP13.29□□□□□ -0.28
SEC13-206ENST00000397102 HEPACAMQ14CZ8 416 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms