RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 YPEL5P62699 121 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 CDK5R2Q13319 367 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 CNN3Q15417 329 aaKnown RBP5.15□□□□□ -1.58
VPS13C-204ENST00000395898 NR0B2Q15466 257 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 CPZQ66K79 652 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 NRMQ8IXM6 262 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM239Q8WW34 195 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 ARNT2Q9HBZ2 717 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 SLC7A7Q9UM01 511 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 ATG2BQ96BY7 2078 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 MCM3APO60318 1980 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 LOC285095A0A1B0GVY8 99 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 NPIPB15A6NHN6 443 aaPredicted RBP5.15□□□□□ -1.58
VPS13C-204ENST00000395898 MC3RP41968 323 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 TAS2R31P59538 309 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 MRPS21P82921 87 aaKnown RBP5.15□□□□□ -1.58
VPS13C-204ENST00000395898 SIX1Q15475 284 aaPredicted RBP5.15□□□□□ -1.58
VPS13C-204ENST00000395898 ANKRD13BQ86YJ7 626 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 DNAJC22Q8N4W6 341 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 OR4K5Q8NGD3 323 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 OR51T1Q8NGJ9 327 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 NEIL2Q969S2 332 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 TSNAXQ99598 290 aaKnown RBP5.15□□□□□ -1.58
VPS13C-204ENST00000395898 BOCQ9BWV1 1114 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 HAPLN2Q9GZV7 340 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 PLEKHJ1Q9NW61 149 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 SMOXQ9NWM0 555 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 IL17CQ9P0M4 197 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 B3GNT3Q9Y2A9 372 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 ZCWPW2A0A1B0GU75 182 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 C17orf105B2RV13 164 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 SC5DO75845 299 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 ZNF14P17017 642 aaPredicted RBP5.15□□□□□ -1.58
VPS13C-204ENST00000395898 AHRP35869 848 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 MAP2K4P45985 399 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 PTH2RP49190 550 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 AKR1C2P52895 323 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 BCL2A1Q16548 175 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 C6orf183Q5T699 404 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 GPR139Q6DWJ6 353 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 TMEM40Q8WWA1 233 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 JPH3Q8WXH2 748 aaPredicted RBP5.15□□□□□ -1.58
VPS13C-204ENST00000395898 PDLIM5Q96HC4 596 aaKnown RBP5.15□□□□□ -1.58
VPS13C-204ENST00000395898 INPP5KQ9BT40 448 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 ARL6Q9H0F7 186 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 INPP5EQ9NRR6 644 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 SACM1LQ9NTJ5 587 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 PRELID1Q9Y255 219 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 PCDHGA7Q9Y5G6 932 aa5.15□□□□□ -1.58
VPS13C-204ENST00000395898 EGFP01133 1207 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 LAMP1P11279 417 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 PBX2P40425 430 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 LSSP48449 732 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 TAS2R20P59543 309 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 RPS26P62854 115 aaKnown RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 ATAD3CQ5T2N8 411 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM236Q5W0B7 351 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 LARP4Q71RC2 724 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 OR5AR1Q8NGP9 310 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 PRRC1Q96M27 445 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 BTBD2Q9BX70 525 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 HCAR1Q9BXC0 346 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 ALOXE3Q9BYJ1 711 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 GSTO2Q9H4Y5 243 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 IGSF5Q9NSI5 407 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 GPR83Q9NYM4 423 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 TRPM6Q9BX84 2022 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 RTCAO00442 366 aaKnown RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 BMP4P12644 408 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 VIPR2P41587 438 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 SLC7A9P82251 487 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 BDH1Q02338 343 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 CCBE1Q6UXH8 406 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 SLC16A9Q7RTY1 509 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 KCTD20Q7Z5Y7 419 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 PDZD9Q8IXQ8 264 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 NAGSQ8N159 534 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 RAB39BQ96DA2 213 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 CASD1Q96PB1 797 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 DPH2Q9BQC3 489 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF649Q9BS31 505 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 KLF16Q9BXK1 252 aaPredicted RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 NAP1L6A6NFF2 107 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 NOTOA8MTQ0 251 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 C12orf71A8MTZ7 269 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 FCER2P06734 321 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 ARSBP15848 533 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 RAB3AP20336 220 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 S100A7P31151 101 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 MAGEA6P43360 314 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 FASLGP48023 281 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 BMXP51813 675 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 ERVK-16P61578 105 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 CLLU1OSQ5K130 101 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 EEF1A1P5Q5VTE0 462 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 NADSYN1Q6IA69 706 aa5.15□□□□□ -1.59
VPS13C-204ENST00000395898 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.15□□□□□ -1.591e-6■■■■□ 22
VPS13C-204ENST00000395898 MRPL21Q7Z2W9 205 aaKnown RBP5.15□□□□□ -1.59
VPS13C-204ENST00000395898 KIF18BQ86Y91 864 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms