RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 NUDT22Q9BRQ3 303 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 FNDC11Q9BVV2 318 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 GPC6Q9Y625 555 aaPredicted RBP13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 FGF17O60258 216 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 PCP4P48539 62 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 PDX1P52945 283 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 ERV3-1Q14264 604 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 EXOSC7Q15024 291 aaKnown RBP13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 CLVS2Q5SYC1 327 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 ZNF605Q86T29 641 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 ERI1Q8IV48 349 aaKnown RBP13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 IL22RA1Q8N6P7 574 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 APOBEC4Q8WW27 367 aaKnown RBP13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 RORBQ92753 470 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 SLC35A4Q96G79 324 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 MOGAT1Q96PD6 335 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 GPR55Q9Y2T6 319 aaPredicted RBP13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 PCDHGA10Q9Y5H3 936 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 PIEZO1Q92508 2521 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 CFAP54Q96N23 3096 aa13.08□□□□□ -0.32
PPP3CA-202ENST00000394853 RP1P56715 2156 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 NPIPA5A0A0B4J1W7 369 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 C9J4A7 227 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 NPIPA7E9PJI5 369 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 NPIPA8P0DM63 369 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 ELAVL4P26378 380 aaKnown RBP13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 ANXA11P50995 505 aaKnown RBP13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 RPP30P78346 268 aaKnown RBP13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 ZER1Q7Z7L7 766 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 C19orf47Q8N9M1 422 aaKnown RBP13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 NT5CQ8TCD5 201 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 GAL3ST4Q96RP7 486 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 ORAI3Q9BRQ5 295 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 FUNDC2Q9BWH2 189 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 CLCA3PQ9Y6N3 262 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 CPSF4LA6NMK7 179 aaKnown RBP13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 TNFSF14O43557 240 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 RGS10O43665 173 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 EPPINO95925 133 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 LCKP06239 509 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 GGT2P36268 569 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 CSNK2BP67870 215 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 SLC35A2P78381 396 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 SF3B4Q15427 424 aaKnown RBP eCLIP13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 GPR68Q15743 365 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 SCAIQ8N9R8 606 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 THAP11Q96EK4 314 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 OR6C1Q96RD1 312 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 GPR83Q9NYM4 423 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 PHF11Q9UIL8 331 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 PILRBQ9UKJ0 227 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 SLC9A8Q9Y2E8 581 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 A0A1B0GTQ1 180 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 RAB19A4D1S5 217 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 DLL1O00548 723 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 CHMP24386 653 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 GP2P55259 537 aaKnown RBP13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 ACY1Q03154 408 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 SLC25A45Q8N413 288 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 AGBL5Q8NDL9 886 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 PIK3R3Q92569 461 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 GABARAPL3Q9BY60 117 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 TRIM45Q9H8W5 580 aaPredicted RBP13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 GIN1Q9NXP7 522 aa13.07□□□□□ -0.32
PPP3CA-202ENST00000394853 DPM1O60762 260 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 SEC14L2O76054 403 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 DCKP27707 260 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 TSFMP43897 325 aaKnown RBP13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 ARHGDIBP52566 201 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 GABARAPL2P60520 117 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 HSD11B2P80365 405 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 MAT1AQ00266 395 aaKnown RBP13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 PROX2Q3B8N5 592 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 TCTE1Q5JU00 501 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 BCDIN3DQ7Z5W3 292 aaKnown RBP13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 IQCF1Q8N6M8 205 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 FAR1Q8WVX9 515 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 ZNF764Q96H86 408 aaPredicted RBP13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 COPS4Q9BT78 406 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 SLC38A1Q9H2H9 487 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 SLC22A7Q9Y694 548 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 THADAQ6YHU6 1953 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 ZNF99A8MXY4 864 aaPredicted RBP13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 CPMP14384 443 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 PCMT1P22061 227 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 CBLP22681 906 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 IL32P24001 234 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 TTKP33981 857 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 B2MP61769 119 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 GPLD1P80108 840 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 SYT16Q17RD7 645 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 PODNL1Q6PEZ8 512 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 TMEM64Q6YI46 380 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 RRM2BQ7LG56 351 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 CLIP4Q8N3C7 705 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 CMTM3Q96MX0 182 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 SEMA6CQ9H3T2 930 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 SEMA4GQ9NTN9 838 aa13.06□□□□□ -0.32
PPP3CA-202ENST00000394853 A4GNTQ9UNA3 340 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms