RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PHF3Q92576 2039 aaKnown RBP11.52□□□□□ -0.57
GGPS1-203ENST00000391855 A0A1W2PQD3 144 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 LINC01387J3KSC0 135 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 SCDO00767 359 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 HNRNPRO43390 633 aaKnown RBP11.52□□□□□ -0.57
GGPS1-203ENST00000391855 OXSR1O95747 527 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-203ENST00000391855 ANGPTL1O95841 491 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 AGR2O95994 175 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 IGKV1D-16P01601 117 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 GLI4P10075 376 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 HPGDP15428 266 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 TBXA2RP21731 343 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 CHMP24386 653 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 DPP4P27487 766 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 MSX1P28360 303 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 S100A3P33764 101 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 DCTP40126 519 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 PPP2R2AP63151 447 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 PMPCAQ10713 525 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 RCAN2Q14206 197 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 GSTA3Q16772 222 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 GRAMD1BQ3KR37 738 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 FAM174BQ3ZCQ3 159 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 GLYR1Q49A26 553 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-203ENST00000391855 ACSF3Q4G176 576 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-203ENST00000391855 PDCD4Q53EL6 469 aaKnown RBP11.52□□□□□ -0.57
GGPS1-203ENST00000391855 SPANXN4Q5MJ08 99 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 NXNQ6DKJ4 435 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 RTL6Q6ICC9 239 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 CLECL1Q8IZS7 167 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 TRIML2Q8N7C3 387 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 OR2M3Q8NG83 312 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 OR4A15Q8NGL6 344 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 LILRB4Q8NHJ6 448 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 GOT1L1Q8NHS2 421 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-203ENST00000391855 CDS1Q92903 461 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 SLC35G5Q96KT7 338 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 SFXN2Q96NB2 322 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 YIPF4Q9BSR8 244 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 WDR55Q9H6Y2 383 aaPredicted RBP11.52□□□□□ -0.57
GGPS1-203ENST00000391855 ALKBH4Q9NXW9 302 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 BTNL2Q9UIR0 455 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 FBXL2Q9UKC9 423 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 CAMK2AQ9UQM7 478 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 GPR45Q9Y5Y3 372 aa11.52□□□□□ -0.57
GGPS1-203ENST00000391855 GOLGA8QA0A0J9YX86 632 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 GOLGA8OA6NCC3 632 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 CD8B2A6NJW9 211 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 HSPB2A8KAH6 182 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 GOLGA8NF8WBI6 632 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 NDUFB5O43674 189 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 SCN2BO60939 215 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 TGDSO95455 350 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 EPPINO95925 133 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 CPN1P15169 458 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 UQCRC2P22695 453 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 COL8A1P27658 744 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 ZFP36L2P47974 494 aaKnown RBP11.51□□□□□ -0.57
GGPS1-203ENST00000391855 GFRA1P56159 465 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 TXNL4AP83876 142 aaKnown RBP11.51□□□□□ -0.57
GGPS1-203ENST00000391855 STX5Q13190 355 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 HSPB2Q16082 182 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 DCST2Q5T1A1 773 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 FIGNL1Q6PIW4 674 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 C6orf120Q7Z4R8 191 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 RPRMLQ8N4K4 120 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 ZNF527Q8NB42 609 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 OR10Q1Q8NGQ4 319 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 OR5AK3PQ8NH89 298 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 ZPLD1Q8TCW7 415 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 MIPOL1Q8TD10 442 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 C1GALT1C1Q96EU7 318 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 WDYHV1Q96HA8 205 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 CCDC115Q96NT0 180 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 DSN1Q9H410 356 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 INTS9Q9NV88 658 aaKnown RBP11.51□□□□□ -0.57
GGPS1-203ENST00000391855 EXD2Q9NVH0 621 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 FLRT3Q9NZU0 649 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 ZIM2Q9NZV7 527 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 USH1CQ9Y6N9 552 aa11.51□□□□□ -0.57
GGPS1-203ENST00000391855 A0A087WZY1 265 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 H3BNH8 94 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 ZNF195O14628 629 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 POLR3GO15318 223 aaPredicted RBP11.5□□□□□ -0.57
GGPS1-203ENST00000391855 PGRP06401 933 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 PEPDP12955 493 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 HK1P19367 917 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 TIMP3P35625 211 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 ANXA11P50995 505 aaKnown RBP11.5□□□□□ -0.57
GGPS1-203ENST00000391855 IRX1P78414 480 aaPredicted RBP11.5□□□□□ -0.57
GGPS1-203ENST00000391855 BCL2A1Q16548 175 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 SLC9B1Q4ZJI4 515 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 RAET1LQ5VY80 246 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 NSUN5P2Q63ZY6 315 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 SP5Q6BEB4 398 aaPredicted RBP11.5□□□□□ -0.57
GGPS1-203ENST00000391855 HIST2H2BCQ6DN03 193 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 OR5M10Q6IEU7 315 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 MSANTD1Q6ZTZ1 278 aa11.5□□□□□ -0.57
GGPS1-203ENST00000391855 MTERF4Q7Z6M4 381 aaKnown RBP11.5□□□□□ -0.57
GGPS1-203ENST00000391855 MARCH3Q86UD3 253 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms