RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 TNFSF13O75888 250 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 SNUPNO95149 360 aaKnown RBP12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 ALOX5P09917 674 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 FCGR2AP12318 317 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 BCKDHAP12694 445 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 PRKAG1P54619 331 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 MAD2L1Q13257 205 aaPredicted RBP12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 SNTB1Q13884 538 aaKnown RBP12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 LSM12Q3MHD2 195 aaKnown RBP12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 UGT3A2Q3SY77 523 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 EMBQ6PCB8 327 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 LUZP2Q86TE4 346 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 MARCH3Q86UD3 253 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 DDIASQ8IXT1 998 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 OR2T11Q8NH01 316 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 TWIST2Q8WVJ9 160 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 SMPDL3BQ92485 455 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 ZIM3Q96PE6 472 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 TSSK3Q96PN8 268 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 FAM111AQ96PZ2 611 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 ALPK1Q96QP1 1244 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 STACQ99469 402 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 HOXD1Q9GZZ0 328 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 C12orf65Q9H3J6 166 aaKnown RBP12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 FANCFQ9NPI8 374 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 UBQLN4Q9NRR5 601 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 CCM2LQ9NUG4 571 aaPredicted RBP12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 FIS1Q9Y3D6 152 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 MED12Q93074 2177 aa12.28□□□□□ -0.44
TRBV4-1-201ENST00000390357 A0A1W2PNV4 684 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 A0A1W2PQD3 144 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 A0A1W2PRB8 838 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 SH3D21A4FU49 640 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 AKAP10O43572 662 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 TGM6O95932 706 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 RAF1P04049 648 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 KRT16P08779 473 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 ZNF17P17021 662 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 HPCAL1P37235 193 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 RPL38P63173 70 aaKnown RBP12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 SGCBQ16585 318 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 SMU1Q2TAY7 513 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 GALNTL6Q49A17 601 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 ATP6AP1LQ52LC2 224 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 GTF2IRD2BQ6EKJ0 949 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 WDR93Q6P2C0 686 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 BHLHB9Q6PI77 547 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 MTERF4Q7Z6M4 381 aaKnown RBP12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 GTF2IRD2Q86UP8 949 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 WDR75Q8IWA0 830 aaKnown RBP12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 KIRREL3Q8IZU9 778 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 METTL25Q8N6Q8 603 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 LRRN4CLQ8ND94 238 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 LINC01560Q8TB33 94 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 TCP10LQ8TDR4 215 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 SLC9A6Q92581 669 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 CIDECQ96AQ7 238 aaPredicted RBP12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 ZBTB8AQ96BR9 441 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 MOAP1Q96BY2 351 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 STARD4Q96DR4 205 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 TMEM109Q9BVC6 243 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 ANKZF1Q9H8Y5 726 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 RNF122Q9H9V4 155 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 DUSP22Q9NRW4 184 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 GLRX2Q9NS18 164 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 GALNT8Q9NY28 637 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 ZNF226Q9NYT6 803 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 BAIAP2L1Q9UHR4 511 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 EIF3LQ9Y262 564 aaKnown RBP12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 CCDC168Q8NDH2 2452 aa12.27□□□□□ -0.45
TRBV4-1-201ENST00000390357 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 GXYLT2A0PJZ3 443 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 C7orf72A4D263 438 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 SCDO00767 359 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 KCNK2O95069 426 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 CD8BP10966 210 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 CD99P14209 185 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 IL11P20809 199 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 PRPS1L1P21108 318 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 RFX3P48380 749 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 PPP2R2AP63151 447 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 STX5Q13190 355 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 TMEM44Q2T9K0 475 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 GRAMD1BQ3KR37 738 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 PDSS1Q5T2R2 415 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 CPTPQ5TA50 214 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 MFSD12Q6NUT3 480 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 UBQLNLQ8IYU4 475 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 GCNT2Q8N0V5 402 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 OR4C3Q8NH37 302 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 PSMA8Q8TAA3 256 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 OR5P2Q8WZ92 322 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 PIK3R3Q92569 461 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 COQ8BQ96D53 544 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 GIMAP5Q96F15 307 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 PGM2Q96G03 612 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 BTBD2Q9BX70 525 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 RTN4RQ9BZR6 473 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 PIGUQ9H490 435 aa12.26□□□□□ -0.45
TRBV4-1-201ENST00000390357 EQTNQ9NQ60 294 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms