RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SIGLEC14Q08ET2 396 aa23.38■■□□□ 1.33
SHOX2-201ENST00000389589 FLYWCH1Q4VC44 716 aa23.38■■□□□ 1.33
SHOX2-201ENST00000389589 Q96MT0 163 aa23.38■■□□□ 1.33
SHOX2-201ENST00000389589 CNPPD1Q9BV87 410 aa23.38■■□□□ 1.33
SHOX2-201ENST00000389589 LIN28AQ9H9Z2 209 aaKnown RBP23.38■■□□□ 1.33
SHOX2-201ENST00000389589 NECTIN3Q9NQS3 549 aa23.38■■□□□ 1.33
SHOX2-201ENST00000389589 LANCL2Q9NS86 450 aa23.38■■□□□ 1.33
SHOX2-201ENST00000389589 TRIM64BA6NI03 449 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 CDK1P06493 297 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 TNNI3P19429 210 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 MAP2K4P45985 399 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 MASP1P48740 699 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 TSPAN31Q12999 210 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 NR0B2Q15466 257 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 SYT6Q5T7P8 510 aaPredicted RBP23.37■■□□□ 1.33
SHOX2-201ENST00000389589 FCGR1BQ92637 280 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 NAA50Q9GZZ1 169 aaKnown RBP23.37■■□□□ 1.33
SHOX2-201ENST00000389589 ZNF768Q9H5H4 540 aaKnown RBP23.37■■□□□ 1.33
SHOX2-201ENST00000389589 Q9N2J8 555 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 ERVK-19Q9WJR5 959 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 HRKO00198 91 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 FADS2O95864 444 aaKnown RBP23.37■■□□□ 1.33
SHOX2-201ENST00000389589 IGFBP1P08833 259 aaPredicted RBP23.37■■□□□ 1.33
SHOX2-201ENST00000389589 FOLR1P15328 257 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 PLK5Q496M5 336 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 CCDC81Q6ZN84 652 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 OR4C6Q8NH72 309 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 YIPF2Q9BWQ6 316 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 OR10A5Q9H207 317 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 PRODH2Q9UF12 536 aa23.37■■□□□ 1.33
SHOX2-201ENST00000389589 NPIPA5A0A0B4J1W7 369 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 TRAPPC13A5PLN9 417 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 A8MU76 341 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 NPIPA7E9PJI5 369 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 M0R129 80 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 NPIPA8P0DM63 369 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 SQSTM1Q13501 440 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 PRICKLE2Q7Z3G6 844 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 GATAD2AQ86YP4 633 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 OR7G1Q8NGA0 311 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 OR8J1Q8NGP2 316 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 SAP25Q8TEE9 199 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 EDAQ92838 391 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 PTCHD1Q96NR3 888 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 GPA33Q99795 319 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 G6PC3Q9BUM1 346 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 KRCC1Q9NPI7 259 aaPredicted RBP23.36■■□□□ 1.33
SHOX2-201ENST00000389589 CNOT2Q9NZN8 540 aaKnown RBP23.36■■□□□ 1.33
SHOX2-201ENST00000389589 TESQ9UGI8 421 aaKnown RBP23.36■■□□□ 1.33
SHOX2-201ENST00000389589 SLC6A14Q9UN76 642 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 NTNG1Q9Y2I2 539 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 OR2W5A6NFC9 320 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 EFCAB10A6NFE3 127 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 DSCR3O14972 297 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 YKT6O15498 198 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 ACVR2AP27037 513 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 OR1D4P47884 311 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 PGDP52209 483 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 NUDT6P53370 316 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 LSM11P83369 360 aaKnown RBP eCLIP23.36■■□□□ 1.33
SHOX2-201ENST00000389589 DSG2Q14126 1118 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 ZSWIM7Q19AV6 140 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 TMEM201Q5SNT2 666 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 TMEM71Q6P5X7 295 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 MBOAT2Q6ZWT7 520 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 NKAIN4Q8IVV8 208 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 FUNDC2Q9BWH2 189 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 GPN2Q9H9Y4 310 aaPredicted RBP23.36■■□□□ 1.33
SHOX2-201ENST00000389589 AMBNQ9NP70 447 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 C14orf105Q9NVL8 296 aa23.36■■□□□ 1.33
SHOX2-201ENST00000389589 ATE1O95260 518 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 THY1P04216 161 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 CCNA2P20248 432 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 DRD5P21918 477 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 OMPP47874 163 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 ST13P50502 369 aaKnown RBP23.35■■□□□ 1.33
SHOX2-201ENST00000389589 QSOX2Q6ZRP7 698 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 RASSF6Q6ZTQ3 369 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 ZNF615Q8N8J6 731 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 C16orf52Q8NHV5 167 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 PIGKQ92643 395 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 NUDT22Q9BRQ3 303 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 SLC7A7Q9UM01 511 aa23.35■■□□□ 1.33
SHOX2-201ENST00000389589 GIPRP48546 466 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 PSMD4P55036 377 aaKnown RBP23.34■■□□□ 1.33
SHOX2-201ENST00000389589 CDK5Q00535 292 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 CSTF1Q05048 431 aaKnown RBP23.34■■□□□ 1.33
SHOX2-201ENST00000389589 TBCEQ15813 527 aaPredicted RBP23.34■■□□□ 1.33
SHOX2-201ENST00000389589 UBE2UQ5VVX9 321 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 ZC3H14Q6PJT7 736 aaKnown RBP23.34■■□□□ 1.33
SHOX2-201ENST00000389589 ZAR1Q86SH2 424 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 ANKRD13BQ86YJ7 626 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 GRAMD2AQ8IUY3 354 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 STX19Q8N4C7 294 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 BCL7BQ9BQE9 202 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 SLC25A19Q9HC21 320 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 ZNF304Q9HCX3 659 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 GPR83Q9NYM4 423 aa23.34■■□□□ 1.33
SHOX2-201ENST00000389589 DHCR7Q9UBM7 475 aaKnown RBP23.34■■□□□ 1.33
SHOX2-201ENST00000389589 HYAL3O43820 417 aaPredicted RBP23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms