RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 FUT1P19526 365 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 CD1CP29017 333 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 HSF2Q03933 536 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 FAM219BQ5XKK7 198 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 SHFQ7M4L6 423 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 TIGARQ9NQ88 270 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 PPT2Q9UMR5 302 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 SATB2Q9UPW6 733 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 J3KTA2 159 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 K7EQS6 105 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 M0R129 80 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 SLC22A1O15245 554 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 RORCP51449 518 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 ATG14Q6ZNE5 492 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 DNAJA4Q8WW22 397 aaPredicted RBP12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 NRSN2Q9GZP1 204 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 PTTG2Q9NZH5 202 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 DAPP1Q9UN19 280 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 NEU3Q9UQ49 428 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 RNF6Q9Y252 685 aa12.28□□□□□ -0.44
PTPRN2-202ENST00000389416 UNC13CQ8NB66 2214 aa12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 FABP12A6NFH5 140 aa12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 FAM171A2A8MVW0 826 aa12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 TPD52L2O43399 206 aaKnown RBP12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 KLK8O60259 260 aa12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 CDRT1O95170 752 aa12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 MRPL2Q5T653 305 aaKnown RBP12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 GARNL3Q5VVW2 1013 aa12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 LIPKQ5VXJ0 399 aa12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 TP53I13Q8NBR0 393 aaPredicted RBP12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 BARD1Q99728 777 aaKnown RBP12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 C1QTNF3Q9BXJ4 246 aa12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 OR10A5Q9H207 317 aa12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 UPB1Q9UBR1 384 aa12.27□□□□□ -0.44
PTPRN2-202ENST00000389416 A0A1W2PPW3 197 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 A0A1W2PR48 441 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 CTNSO60931 367 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 JRKO75564 520 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 ARL6IP5O75915 188 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 PPP1R3DO95685 299 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 SLC15A1P46059 708 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 EEF1A1P5Q5VTE0 462 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 TSPYL5Q86VY4 417 aaPredicted RBP12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 SENP5Q96HI0 755 aaPredicted RBP12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 TRPV4Q9HBA0 871 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 AGPAT4Q9NRZ5 378 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 NFKBIL1Q9UBC1 381 aaPredicted RBP12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 PARP14Q460N5 1801 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 IGHV3-20A0A0C4DH32 117 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 A0A1W2PRQ8 180 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 SSNA1O43805 119 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 PRAMEF10O60809 474 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 KCNK5O95279 499 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 ETHE1O95571 254 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 ZNF28P17035 718 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 TCN2P20062 427 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 DCKP27707 260 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 LIM2P55344 173 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 YBX1P67809 324 aaKnown RBP12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 TLE3Q04726 772 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 NKAIN1Q4KMZ8 207 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 PRAMEF8Q5VWM4 474 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 PRAMEF7Q5VXH5 474 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 ARHGAP11AQ6P4F7 1023 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 IGFN1Q86VF2 1251 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 MARVELD2Q8N4S9 558 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 ZNF283Q8N7M2 679 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 ZNF675Q8TD23 568 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 ELP4Q96EB1 424 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 OR5B2Q96R09 309 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 B3GNT4Q9C0J1 378 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 RLIMQ9NVW2 624 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 GPR83Q9NYM4 423 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 CSNK1G3Q9Y6M4 447 aa12.27□□□□□ -0.45
PTPRN2-202ENST00000389416 EPOPA6NHQ4 379 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 LMO7DNF2Z398 122 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 NDUFB2O95178 105 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 TUBA4AP68366 448 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 PRAMEF20Q5VT98 475 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 LRFN4Q6PJG9 635 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 ACBD7Q8N6N7 88 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 PRRC1Q96M27 445 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 LRRC61Q9BV99 259 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 TAS2R10Q9NYW0 307 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 EXOSC1Q9Y3B2 195 aaKnown RBP12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 A0A1W2PPK0 400 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 CIB4A0PJX0 185 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 PCDH17O14917 1159 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 PPM1DO15297 605 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 VBP1P61758 197 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 ARG2P78540 354 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 LEG1Q6P5S2 330 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 KCTD18Q6PI47 426 aaPredicted RBP12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 ZFP41Q8N8Y5 198 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 BAHD1Q8TBE0 780 aaPredicted RBP12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 THAP4Q8WY91 577 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 BMFQ96LC9 184 aa12.26□□□□□ -0.45
PTPRN2-202ENST00000389416 SLC35A3Q9Y2D2 325 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms