RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 RGS9O75916 674 aaPredicted RBP13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 SIX6O95475 246 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 IGLV3-27P01718 113 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 EPHX1P07099 455 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 ALPIP09923 528 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 CSF2RAP15509 400 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 MMP11P24347 488 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 ARHGDIBP52566 201 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 IRF8Q02556 426 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 ZNF791Q3KP31 576 aaPredicted RBP13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 SPOUT1Q5T280 376 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 FAM71CQ8NEG0 241 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 OR4F15Q8NGB8 312 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 OR51Q1Q8NH59 317 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 SPRYD4Q8WW59 207 aaPredicted RBP13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 THAP4Q8WY91 577 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 WDR89Q96FK6 387 aaPredicted RBP13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 GPA33Q99795 319 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 SLC12A9Q9BXP2 914 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 EXOSC3Q9NQT5 275 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 OR2M5A3KFT3 312 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 COCHO43405 550 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 CHST10O43529 356 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 KDELR3O43731 214 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 PRAF2O60831 178 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 SHC1P29353 583 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 ATP5C1P36542 298 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 SLC6A11P48066 632 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 RAP2BP61225 183 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 ERVK-25P63136 954 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 DOC2AQ14183 400 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 UAP1L1Q3KQV9 507 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 REEP3Q6NUK4 255 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 IKBIPQ70UQ0 350 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 TRMT10AQ8TBZ6 339 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 HAVCR2Q8TDQ0 301 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 MRPS31Q92665 395 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 VWCEQ96DN2 955 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 ZFP3Q96NJ6 502 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 FAIM2Q9BWQ8 316 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 NTMQ9P121 344 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 TINAGQ9UJW2 476 aa13.74□□□□□ -0.21
VPS9D1-201ENST00000389386 CARNS1A5YM72 827 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 RFXAPO00287 272 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 GATBO75879 557 aaKnown RBP13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 OR2A4O95047 310 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 CBSLP0DN79 551 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 PPP3CBP16298 524 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 ACRV1P26436 265 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 CBSP35520 551 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 OR10A3P58181 314 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 SEC61A1P61619 476 aaKnown RBP13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 DYRK1AQ13627 763 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 GK2Q14410 553 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 RPS26P11Q5JNZ5 115 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 METTL11BQ5VVY1 283 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 LIPJQ5W064 366 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 OR5M10Q6IEU7 315 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 CXorf57Q6NSI4 855 aaKnown RBP13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 SFXN4Q6P4A7 337 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 PODNL1Q6PEZ8 512 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 CCDC36Q8IYA8 594 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 KLHL36Q8N4N3 616 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 POGLUT1Q8NBL1 392 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 OR4D11Q8NGI4 311 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 TRIM43Q96BQ3 446 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 OR2A7Q96R45 310 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 WFDC6Q9BQY6 131 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 TBX21Q9UL17 535 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 LRRC72A6NJI9 287 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 KDM4EB2RXH2 506 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 UBL3O95164 117 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 CLTBP09497 229 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 ZNF8P17098 575 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 VEGFCP49767 419 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 FZD5Q13467 585 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 UBXN2BQ14CS0 331 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 ZNF528Q3MIS6 628 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 SMARCD3Q6STE5 483 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 RAB11FIP2Q7L804 512 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 KLBQ86Z14 1044 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 HORMAD2Q8N7B1 307 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 ARMC5Q96C12 935 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 C10orf90Q96M02 699 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 TREX2Q9BQ50 279 aaPredicted RBP13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 PLA2G12AQ9BZM1 189 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 FN3KQ9H479 309 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 SLC6A20Q9NP91 592 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 IL26Q9NPH9 171 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 NANSQ9NR45 359 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 ACAD8Q9UKU7 415 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 CKAP5Q14008 2032 aa13.73□□□□□ -0.21
VPS9D1-201ENST00000389386 TRBV5-4A0A0C4DH59 114 aa13.72□□□□□ -0.21
VPS9D1-201ENST00000389386 A0A1B0GUH1 482 aa13.72□□□□□ -0.21
VPS9D1-201ENST00000389386 GNG14A0A1W2PPG7 69 aa13.72□□□□□ -0.21
VPS9D1-201ENST00000389386 SLC9B1P1A6NJY1 282 aa13.72□□□□□ -0.21
VPS9D1-201ENST00000389386 ARHGEF33A8MVX0 844 aa13.72□□□□□ -0.21
VPS9D1-201ENST00000389386 MID1O15344 667 aa13.72□□□□□ -0.21
VPS9D1-201ENST00000389386 RNF13O43567 381 aa13.72□□□□□ -0.21
VPS9D1-201ENST00000389386 SNAPINO95295 136 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms