RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 LIMS1P48059 325 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 RAD23AP54725 363 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 PSMD4P55036 377 aaKnown RBP13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 EPS8Q12929 822 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 PIN1Q13526 163 aaPredicted RBP13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 NPTX1Q15818 432 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 NNATQ16517 81 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 DECR1Q16698 335 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 RFX4Q33E94 735 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 SLC36A3Q495N2 470 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 EIPR1Q53HC9 387 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 COLEC12Q5KU26 742 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 TMEM205Q6UW68 189 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 SLC29A4Q7RTT9 530 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 CPEB2Q7Z5Q1 589 aaKnown RBP13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 ATG16L2Q8NAA4 619 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 GALNT6Q8NCL4 622 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 PIK3C3Q8NEB9 887 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 PHF10Q8WUB8 498 aaKnown RBP13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 DEPDC7Q96QD5 511 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 ALPK1Q96QP1 1244 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 SPSB2Q99619 263 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 FNDC11Q9BVV2 318 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 PRR14Q9BWN1 585 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 ARMC7Q9H6L4 198 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 WDR54Q9H977 334 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 RLIMQ9NVW2 624 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 TOR4AQ9NXH8 423 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 UBAP1Q9NZ09 502 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 PISDQ9UG56 409 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 TMEFF2Q9UIK5 374 aaPredicted RBP13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 KCNE5Q9UJ90 142 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 NXT1Q9UKK6 140 aaKnown RBP13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 ACAD8Q9UKU7 415 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 TMCC3Q9ULS5 477 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 A4GNTQ9UNA3 340 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 PCNX2A6NKB5 2137 aa13.43□□□□□ -0.26
SYNGR1-204ENST00000381535 CENPVL1A0A0U1RR11 272 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 CLDN24A6NM45 220 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 C9J4A7 227 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 H0YAE9 185 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 AP3D1O14617 1153 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 FRS3O43559 492 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 SEMA7AO75326 666 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 CCNYL3P0C7X3 344 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 CDK4P11802 303 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 NID1P14543 1247 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 GPR143P51810 404 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 ATP12AP54707 1039 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 RGS8P57771 180 aaPredicted RBP13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 ADARB1P78563 741 aaKnown RBP13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 ZNF141Q15928 474 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 DCST1Q5T197 706 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 KDM4DQ6B0I6 523 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 FAHD1Q6P587 224 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 DHRS13Q6UX07 377 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 SLCO6A1Q86UG4 719 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 CHERPQ8IWX8 916 aaKnown RBP13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 TAGAPQ8N103 731 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 ZNF555Q8NEP9 628 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 NFAM1Q8NET5 270 aaPredicted RBP13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 OR10G2Q8NGC3 310 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 NR4A3Q92570 626 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 DHRS1Q96LJ7 313 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 MCHR1Q99705 422 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 NXF5Q9H1B4 397 aaKnown RBP13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 TOR3AQ9H497 397 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 EVA1AQ9H8M9 152 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 FAM118AQ9NWS6 357 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 KIF17Q9P2E2 1029 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 C19orf25Q9UFG5 118 aaPredicted RBP13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 MRTO4Q9UKD2 239 aaKnown RBP13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 PCDHGA10Q9Y5H3 936 aa13.42□□□□□ -0.26
SYNGR1-204ENST00000381535 CCDC187A0A096LP49 1063 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 TEX51A0A1B0GUA7 166 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 FRG2CA6NGY1 282 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 SAGE2PA6NJ88 616 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 TPST2O60704 377 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 MITFO75030 526 aaPredicted RBP13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 STK17BO94768 372 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 IL33O95760 270 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 UBTFL6P0CB48 400 aaPredicted RBP13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 ANXA8P13928 327 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 FUT4P22083 530 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 IGFBP5P24593 272 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 IFNA8P32881 189 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 NOVA1P51513 510 aaKnown RBP13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 TAS2R41P59536 307 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 IL1RL1Q01638 556 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 ZSWIM7Q19AV6 140 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 PDZK1Q5T2W1 519 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 SWT1Q5T5J6 900 aaKnown RBP13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 MRPL2Q5T653 305 aaKnown RBP13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 RNF220Q5VTB9 566 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 TTC23Q5W5X9 447 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 UGT2A3Q6UWM9 527 aa13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 C6orf15Q6UXA7 325 aaPredicted RBP13.41□□□□□ -0.26
SYNGR1-204ENST00000381535 GLRX5Q86SX6 157 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms