RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 SYT14P1Q58G82 188 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 EXOSC6Q5RKV6 272 aaKnown RBP11.76□□□□□ -0.53
VPS16-202ENST00000380445 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 GDPGP1Q6ZNW5 385 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 MBOAT2Q6ZWT7 520 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 GDF7Q7Z4P5 450 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 BTLAQ7Z6A9 289 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 MFSD4AQ8N468 514 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 OR9Q1Q8NGQ5 310 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 CHCHD6Q9BRQ6 235 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 PRR14Q9BWN1 585 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 PHF7Q9BWX1 381 aaPredicted RBP11.76□□□□□ -0.53
VPS16-202ENST00000380445 PRO3102Q9H379 93 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 POLE3Q9NRF9 147 aa11.76□□□□□ -0.53
VPS16-202ENST00000380445 DIMT1Q9UNQ2 313 aaKnown RBP11.76□□□□□ -0.53
VPS16-202ENST00000380445 A6NL46 340 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 B4DGG1 531 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 PRODHO43272 600 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 MBTPS2O43462 519 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 SRPX2O60687 465 aaPredicted RBP11.75□□□□□ -0.53
VPS16-202ENST00000380445 SLC35E2P0CK97 266 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 EEF1A1P68104 462 aaKnown RBP11.75□□□□□ -0.53
VPS16-202ENST00000380445 IFITM2Q01629 132 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 ELOCQ15369 112 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 AGAP7PQ5VUJ5 663 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 TUBA3EQ6PEY2 450 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 KIF18BQ86Y91 864 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 NANOGP1Q8N7R0 232 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 C19orf47Q8N9M1 422 aaKnown RBP11.75□□□□□ -0.53
VPS16-202ENST00000380445 OR5T3Q8NGG3 340 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 GPR151Q8TDV0 419 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 FAM46AQ96IP4 442 aaKnown RBP11.75□□□□□ -0.53
VPS16-202ENST00000380445 ZNF582Q96NG8 517 aaPredicted RBP11.75□□□□□ -0.53
VPS16-202ENST00000380445 EGLN3Q9H6Z9 239 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 TMEM74BQ9NUR3 256 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 MRPS18AQ9NVS2 196 aaKnown RBP11.75□□□□□ -0.53
VPS16-202ENST00000380445 MAT2BQ9NZL9 334 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 FBXL21Q9UKT6 434 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 METTL15A6NJ78 407 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 SGK494L7N484 410 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 ARHGAP33O14559 1287 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 UBXN7O94888 489 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 NID1P14543 1247 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 ST6GAL1P15907 406 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 RPS4Y1P22090 263 aaKnown RBP11.75□□□□□ -0.53
VPS16-202ENST00000380445 PSMA1P25786 263 aaKnown RBP11.75□□□□□ -0.53
VPS16-202ENST00000380445 LIMK1P53667 647 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 LSM11P83369 360 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■■□ 23.2
VPS16-202ENST00000380445 TDGQ13569 410 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 RFPL4BQ6ZWI9 263 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 ZNF761Q86XN6 746 aaPredicted RBP11.75□□□□□ -0.53
VPS16-202ENST00000380445 SFTPA2Q8IWL1 248 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 FRMD1Q8N878 549 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 MINDY2Q8NBR6 621 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 CTHRC1Q96CG8 243 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 LRRC61Q9BV99 259 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 TAPBPLQ9BX59 468 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 CNIH4Q9P003 139 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 CFL2Q9Y281 166 aa11.75□□□□□ -0.53
VPS16-202ENST00000380445 LSM2Q9Y333 95 aaKnown RBP11.75□□□□□ -0.53
VPS16-202ENST00000380445 BLACEA4D250 179 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 CSO75390 466 aaKnown RBP11.74□□□□□ -0.53
VPS16-202ENST00000380445 MYL12AP19105 171 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 CD40LGP29965 261 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 S100A5P33763 92 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 GRK5P34947 590 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 SOX18P35713 384 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 PPP5CP53041 499 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 POU6F2P78424 691 aaPredicted RBP11.74□□□□□ -0.53
VPS16-202ENST00000380445 RAB40BQ12829 278 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 PERM1Q5SV97 790 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 CCNJQ5T5M9 372 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 ATCAYQ86WG3 371 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 GKN2Q86XP6 184 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 NKAIN4Q8IVV8 208 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 TMEM52Q8NDY8 209 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 SIMC1Q8NDZ2 872 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 RFKQ969G6 155 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 SLC6A18Q96N87 628 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 OPALINQ96PE5 141 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.74□□□□□ -0.53
VPS16-202ENST00000380445 PLA2G12AQ9BZM1 189 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 NXF2Q9GZY0 626 aaKnown RBP11.74□□□□□ -0.53
VPS16-202ENST00000380445 MED17Q9NVC6 651 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 IL20Q9NYY1 176 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 MRPS33Q9Y291 106 aaKnown RBP11.74□□□□□ -0.53
VPS16-202ENST00000380445 UNC80Q8N2C7 3258 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 TRAPPC13A5PLN9 417 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 KIAA0513O60268 411 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 OR10H2O60403 315 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 ADRA2AP08913 450 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 UBL4AP11441 157 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 FASLGP48023 281 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 PPP1CAP62136 330 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 HOXC5Q00444 222 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 MLLT11Q13015 90 aaPredicted RBP11.74□□□□□ -0.53
VPS16-202ENST00000380445 SIGIRRQ6IA17 410 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 ZNF438Q7Z4V0 828 aa11.74□□□□□ -0.53
VPS16-202ENST00000380445 MCATQ8IVS2 390 aaKnown RBP11.74□□□□□ -0.53
VPS16-202ENST00000380445 RNF113BQ8IZP6 322 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms