RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 GLIPR2Q9H4G4 154 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 MID1IP1Q9NPA3 183 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 GRID1Q9ULK0 1009 aa20.74■□□□□ 0.91
U2AF1-202ENST00000380276 FN1P02751 2386 aaKnown RBP20.73■□□□□ 0.91
U2AF1-202ENST00000380276 GOLGA8RI6L899 631 aa20.73■□□□□ 0.91
U2AF1-202ENST00000380276 CRCPO75575 148 aa20.73■□□□□ 0.91
U2AF1-202ENST00000380276 KCNH1O95259 989 aa20.73■□□□□ 0.91
U2AF1-202ENST00000380276 OPN1LWP04000 364 aa20.73■□□□□ 0.91
U2AF1-202ENST00000380276 LOXP28300 417 aaPredicted RBP20.73■□□□□ 0.91
U2AF1-202ENST00000380276 SLC6A8P48029 635 aa20.73■□□□□ 0.91
U2AF1-202ENST00000380276 GLYR1Q49A26 553 aaPredicted RBP20.73■□□□□ 0.91
U2AF1-202ENST00000380276 OR6K3Q8NGY3 331 aa20.73■□□□□ 0.91
U2AF1-202ENST00000380276 CXorf56Q9H5V9 222 aa20.73■□□□□ 0.91
U2AF1-202ENST00000380276 FANCFQ9NPI8 374 aa20.73■□□□□ 0.91
U2AF1-202ENST00000380276 NSD1Q96L73 2696 aaPredicted RBP20.73■□□□□ 0.91
U2AF1-202ENST00000380276 ARID1AO14497 2285 aa20.73■□□□□ 0.91
U2AF1-202ENST00000380276 GXYLT2A0PJZ3 443 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 SYNGR4O95473 234 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 THBDP07204 575 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 PPP3CBP16298 524 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 GPC1P35052 558 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 PRKAA2P54646 552 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 HSPB3Q12988 150 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 GRAMD1BQ3KR37 738 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 FAM71E1Q6IPT2 247 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 SZRD1Q7Z422 152 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 GALNT10Q86SR1 603 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 GGNQ86UU5 652 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 OR2L13Q8N349 312 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 GATSQ8NAP1 163 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 GPR151Q8TDV0 419 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 PIK3R3Q92569 461 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 ELP4Q96EB1 424 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 AMDHD1Q96NU7 426 aa20.72■□□□□ 0.91
U2AF1-202ENST00000380276 MCTS1Q9ULC4 181 aaKnown RBP20.72■□□□□ 0.91
U2AF1-202ENST00000380276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.72■□□□□ 0.91
U2AF1-202ENST00000380276 RAI1Q7Z5J4 1906 aaPredicted RBP20.72■□□□□ 0.91
U2AF1-202ENST00000380276 HEATR5AQ86XA9 2040 aa20.71■□□□□ 0.91
U2AF1-202ENST00000380276 PLAUP00749 431 aa20.71■□□□□ 0.91
U2AF1-202ENST00000380276 FOXA1P55317 472 aa20.71■□□□□ 0.91
U2AF1-202ENST00000380276 GUSBP1Q15486 140 aa20.71■□□□□ 0.91
U2AF1-202ENST00000380276 WDR75Q8IWA0 830 aaKnown RBP20.71■□□□□ 0.91
U2AF1-202ENST00000380276 MMGT1Q8N4V1 131 aa20.71■□□□□ 0.91
U2AF1-202ENST00000380276 OR10D3Q8NH80 312 aa20.71■□□□□ 0.91
U2AF1-202ENST00000380276 L3HYPDHQ96EM0 354 aa20.71■□□□□ 0.91
U2AF1-202ENST00000380276 PLPPR2Q96GM1 343 aa20.71■□□□□ 0.91
U2AF1-202ENST00000380276 GMPPAQ96IJ6 420 aaPredicted RBP20.71■□□□□ 0.91
U2AF1-202ENST00000380276 LMF2Q9BU23 707 aaKnown RBP20.71■□□□□ 0.91
U2AF1-202ENST00000380276 C12orf49Q9H741 205 aa20.71■□□□□ 0.91
U2AF1-202ENST00000380276 MYNNQ9NPC7 610 aa20.71■□□□□ 0.91
U2AF1-202ENST00000380276 CXCL13O43927 109 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 NID1P14543 1247 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 PRKAG1P54619 331 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 NR1H2P55055 460 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 ATP5J2P56134 94 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 APOOLQ6UXV4 268 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 STAC2Q6ZMT1 411 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 STK32CQ86UX6 486 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 FBXO30Q8TB52 745 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 C11orf24Q96F05 449 aaPredicted RBP20.7■□□□□ 0.9
U2AF1-202ENST00000380276 ACTR6Q9GZN1 396 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 GSTO2Q9H4Y5 243 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 TMEM185BQ9H7F4 350 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 PLSCR4Q9NRQ2 329 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 SIRT5Q9NXA8 310 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 PCNX3Q9H6A9 2034 aa20.7■□□□□ 0.9
U2AF1-202ENST00000380276 KLF4O43474 513 aa20.69■□□□□ 0.9
U2AF1-202ENST00000380276 NDUFB5O43674 189 aa20.69■□□□□ 0.9
U2AF1-202ENST00000380276 SS18L1O75177 396 aaPredicted RBP20.69■□□□□ 0.9
U2AF1-202ENST00000380276 PSMG1O95456 288 aa20.69■□□□□ 0.9
U2AF1-202ENST00000380276 IGKV1D-16P01601 117 aa20.69■□□□□ 0.9
U2AF1-202ENST00000380276 ZNF17P17021 662 aa20.69■□□□□ 0.9
U2AF1-202ENST00000380276 PRR5P85299 388 aa20.69■□□□□ 0.9
U2AF1-202ENST00000380276 OCRLQ01968 901 aa20.69■□□□□ 0.9
U2AF1-202ENST00000380276 TIFABQ6ZNK6 161 aa20.69■□□□□ 0.9
U2AF1-202ENST00000380276 ZNF551Q7Z340 670 aaPredicted RBP20.69■□□□□ 0.9
U2AF1-202ENST00000380276 EXOC3L1Q86VI1 746 aa20.69■□□□□ 0.9
U2AF1-202ENST00000380276 LCA5Q86VQ0 697 aa20.69■□□□□ 0.9
U2AF1-202ENST00000380276 PAQR5Q9NXK6 330 aaPredicted RBP20.69■□□□□ 0.9
U2AF1-202ENST00000380276 SERTM1A2A2V5 107 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 TNFSF11O14788 317 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 GSTA1P08263 222 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 PRPS2P11908 318 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 ZNF41P51814 821 aaPredicted RBP20.68■□□□□ 0.9
U2AF1-202ENST00000380276 WHAMMP3Q1A5X7 153 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 CTU2Q2VPK5 515 aaKnown RBP20.68■□□□□ 0.9
U2AF1-202ENST00000380276 VPS26BQ4G0F5 336 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 ANKRD26P1Q6NSI1 321 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 BEND4Q6ZU67 534 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 SH2D5Q6ZV89 423 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 NOA1Q8NC60 698 aaKnown RBP20.68■□□□□ 0.9
U2AF1-202ENST00000380276 SH3YL1Q96HL8 342 aaPredicted RBP20.68■□□□□ 0.9
U2AF1-202ENST00000380276 RNF145Q96MT1 663 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 TACO1Q9BSH4 297 aaKnown RBP20.68■□□□□ 0.9
U2AF1-202ENST00000380276 RRAGDQ9NQL2 400 aaPredicted RBP20.68■□□□□ 0.9
U2AF1-202ENST00000380276 TAS2R7Q9NYW3 318 aa20.68■□□□□ 0.9
U2AF1-202ENST00000380276 IGLV3-32A0A0A0MS00 114 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 TTC36A6NLP5 189 aa20.67■□□□□ 0.9
U2AF1-202ENST00000380276 UBFD1O14562 309 aaKnown RBP20.67■□□□□ 0.9
U2AF1-202ENST00000380276 HS3ST1O14792 307 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms