RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 AP3D1O14617 1153 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 PRKNO60260 465 aaPredicted RBP16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 SCRG1O75711 98 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 IGKV3-11P04433 115 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 GKN3PP0CG01 181 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 FMO3P31513 532 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 RORAP35398 523 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 NUP107P57740 925 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 ELAVL1Q15717 326 aaKnown RBP16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 NSDHLQ15738 373 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 CLPPQ16740 277 aaPredicted RBP16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 PDZK1Q5T2W1 519 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 ZER1Q7Z7L7 766 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 ZNF721Q8TF20 911 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 APH1BQ8WW43 257 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 ATOH1Q92858 354 aaPredicted RBP16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 FKBP10Q96AY3 582 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 CLIP3Q96DZ5 547 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 UCK2Q9BZX2 261 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 OR8D2Q9GZM6 311 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 RASSF1Q9NS23 344 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 PRODH2Q9UF12 536 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 RNF6Q9Y252 685 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 KMT2EQ8IZD2 1858 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 A0A087WUU8 490 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 KHNYNO15037 678 aaKnown RBP16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 XPNPEP2O43895 674 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 WBP4O75554 376 aaKnown RBP16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 ANGPTL1O95841 491 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 MMP11P24347 488 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 CHMP24386 653 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 UGT2B15P54855 530 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 TARDBPQ13148 414 aaKnown RBP eCLIP16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 TRAM2Q15035 370 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 PTGES3Q15185 160 aaKnown RBP16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 DBX2Q6ZNG2 339 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 PLEKHM3Q6ZWE6 761 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 BCORP1Q8N888 145 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 SLC2A12Q8TD20 617 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 ZNF566Q969W8 418 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 TMIGD2Q96BF3 282 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 TGIF2Q9GZN2 237 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 PAK1IP1Q9NWT1 392 aaPredicted RBP16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 CBLCQ9ULV8 474 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 CLCA3PQ9Y6N3 262 aa16.06■□□□□ 0.16
THUMPD2-201ENST00000378727 GPR179Q6PRD1 2367 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 IGLV3-12A0A075B6K2 115 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 NPIPB9F8W1W9 429 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 IGFBP1P08833 259 aaPredicted RBP16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 HTR1AP08908 422 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 ZNF883P0CG24 379 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 EEF1B2P24534 225 aaKnown RBP16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 HTR2AP28223 471 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 CRISP1P54107 249 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 ESRRGP62508 458 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 ST3GAL3Q11203 375 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 TOP3AQ13472 1001 aaPredicted RBP16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 SMN1Q16637 294 aaKnown RBP16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 ZNF773Q6PK81 442 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 SHISA6Q6ZSJ9 500 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 GDF7Q7Z4P5 450 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 NKAIN4Q8IVV8 208 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 BPIFB6Q8NFQ5 453 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 STT3BQ8TCJ2 826 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 LOXL4Q96JB6 756 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 LMF1Q96S06 567 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 GPA33Q99795 319 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 ANKRD19PQ9H560 264 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 ENOPH1Q9UHY7 261 aa16.05■□□□□ 0.16
THUMPD2-201ENST00000378727 SMIM31A0A1B0GVY4 71 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 LNP1A1A4G5 178 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 TTC36A6NLP5 189 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 ZAR1LA6NP61 321 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 GDF9O60383 454 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 OR5F1O95221 314 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 TP53P04637 393 aaPredicted RBP16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 CCDC159P0C7I6 412 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 OSMP13725 252 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 GABARAPL2P60520 117 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 NKAIN1Q4KMZ8 207 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 PLA2G2CQ5R387 149 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 TMEM236Q5W0B7 351 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 ZNF385CQ66K41 422 aaPredicted RBP16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 C1orf94Q6P1W5 598 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 LANCL3Q6ZV70 420 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 LSRQ86X29 649 aaPredicted RBP16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 LINC00471Q8N535 108 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 PLPP5Q8NEB5 264 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 FAM81AQ8TBF8 368 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 SLC38A4Q969I6 547 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 SLC41A3Q96GZ6 507 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 NUDT9Q9BW91 350 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 RBM38Q9H0Z9 239 aaKnown RBP16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 OR10H1Q9Y4A9 318 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 PCDHGA10Q9Y5H3 936 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 R4GN57 208 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 SOX14O95416 240 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 DRD5P21918 477 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 GRK6P43250 576 aa16.04■□□□□ 0.16
THUMPD2-201ENST00000378727 PIGFQ07326 219 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms