RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 METRNLQ641Q3 311 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 OR4C11Q6IEV9 310 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 KIAA1211LQ6NV74 962 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 BHLHB9Q6PI77 547 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 SZRD1Q7Z422 152 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 SFTPA1Q8IWL2 248 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 LINC01555Q8NAE3 123 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 OR8K5Q8NH50 307 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 CREB3L1Q96BA8 519 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 LGR4Q9BXB1 951 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 PCBD2Q9H0N5 130 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 RANBP3Q9H6Z4 567 aaPredicted RBP12.96□□□□□ -0.33
SF1-205ENST00000377394 BCL2L10Q9HD36 194 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 MRPS18AQ9NVS2 196 aaKnown RBP12.96□□□□□ -0.33
SF1-205ENST00000377394 TRPC4Q9UBN4 977 aa12.96□□□□□ -0.33
SF1-205ENST00000377394 PRR23AA6NEV1 266 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 LGALS8O00214 317 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 EFCAB14O75071 495 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 HSD17B2P37059 387 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 EVX1P49640 407 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 TPMTP51580 245 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 RAB14P61106 215 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 CSNK1G2P78368 415 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 INSL4Q14641 139 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 UAP1L1Q3KQV9 507 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 C3orf38Q5JPI3 329 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 LRFN4Q6PJG9 635 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 ADAMTSL4Q6UY14 1074 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 ZNF793Q6ZN11 406 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 KANSL1Q7Z3B3 1105 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 HERVK_113Q902F9 699 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 USB1Q9BQ65 265 aaKnown RBP12.96□□□□□ -0.34
SF1-205ENST00000377394 PITHD1Q9GZP4 211 aaPredicted RBP12.96□□□□□ -0.34
SF1-205ENST00000377394 ZCCHC3Q9NUD5 404 aaKnown RBP12.96□□□□□ -0.34
SF1-205ENST00000377394 HRH3Q9Y5N1 445 aa12.96□□□□□ -0.34
SF1-205ENST00000377394 CASKO14936 926 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 PRKRAO75569 313 aaKnown RBP12.95□□□□□ -0.34
SF1-205ENST00000377394 PTGER1P34995 402 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 HDDC2Q7Z4H3 204 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 LINC00471Q8N535 108 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 PRRC1Q96M27 445 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 FOLH1BQ9HBA9 442 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 ZNF304Q9HCX3 659 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 SLC35C2Q9NQQ7 365 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 NUDT15Q9NV35 164 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 PPIEQ9UNP9 301 aaKnown RBP12.95□□□□□ -0.34
SF1-205ENST00000377394 SLC9A8Q9Y2E8 581 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 SF3B6Q9Y3B4 125 aaKnown RBP12.95□□□□□ -0.34
SF1-205ENST00000377394 IGKV1-8A0A0C4DH67 115 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 STK25O00506 426 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 KIAA0355O15063 1070 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 TFPIP10646 304 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 DRD2P14416 443 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 EPCAMP16422 314 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 HK1P19367 917 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 PPP2R1BP30154 601 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 WNT4P56705 351 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 RAB8AP61006 207 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 TRA2BP62995 288 aaKnown RBP12.95□□□□□ -0.34
SF1-205ENST00000377394 PPP3R1P63098 170 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 FABP5Q01469 135 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 ZNF697Q5TEC3 545 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 FAM46CQ5VWP2 391 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 TMEM91Q6ZNR0 172 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 LRRTM4Q86VH4 590 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 MEX3DQ86XN8 651 aaKnown RBP12.95□□□□□ -0.34
SF1-205ENST00000377394 BEST4Q8NFU0 473 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 BBS10Q8TAM1 723 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 SGTBQ96EQ0 304 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 SHARPINQ9H0F6 387 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 SAV1Q9H4B6 383 aaPredicted RBP12.95□□□□□ -0.34
SF1-205ENST00000377394 FGF20Q9NP95 211 aaPredicted RBP12.95□□□□□ -0.34
SF1-205ENST00000377394 CTPS2Q9NRF8 586 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 SHISA3A0PJX4 238 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 OTOL1A6NHN0 477 aaPredicted RBP12.95□□□□□ -0.34
SF1-205ENST00000377394 ADH1CP00326 375 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 RPN2P04844 631 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 ANXA3P12429 323 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 STOMP27105 288 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 SLC6A1P30531 599 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 HTRA4P83105 476 aaPredicted RBP12.95□□□□□ -0.34
SF1-205ENST00000377394 GAB4Q2WGN9 574 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 PLK5Q496M5 336 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 MRGPREQ86SM8 312 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 TMEM163Q8TC26 289 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 CXorf40AQ8TE69 158 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 TRIM43Q96BQ3 446 aaPredicted RBP12.95□□□□□ -0.34
SF1-205ENST00000377394 ATF6BQ99941 703 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 UQCC2Q9BRT2 126 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 YIPF4Q9BSR8 244 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 REG4Q9BYZ8 158 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 GSX2Q9BZM3 304 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 GHITMQ9H3K2 345 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 EGLN3Q9H6Z9 239 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 SDHAF2Q9NX18 166 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 GMEB2Q9UKD1 530 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 FKBP7Q9Y680 259 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 CKAP5Q14008 2032 aa12.95□□□□□ -0.34
SF1-205ENST00000377394 MUC22E2RYF6 1773 aaPredicted RBP12.94□□□□□ -0.34
SF1-205ENST00000377394 LRIT2A6NDA9 550 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms