RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 OR6Y1Q8NGX8 325 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 DUSP19Q8WTR2 217 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 PPCDCQ96CD2 204 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 MS4A4EQ96PG1 132 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 TBK1Q9UHD2 729 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 ZNF337Q9Y3M9 751 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 ALG1L2C9J202 215 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 G3V2L1 256 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 NDUFB5O43674 189 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 TBX19O60806 448 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 ANGPTL1O95841 491 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 PROCP04070 461 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 INHBBP09529 407 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 PABPC4LP0CB38 370 aaKnown RBP13.29□□□□□ -0.28
HDAC6-204ENST00000376643 GABRA3P34903 492 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 CRHR1P34998 444 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 KIR2DL2P43627 348 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-204ENST00000376643 ASMTP46597 345 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 SERPINB4P48594 390 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 ZNF41P51814 821 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-204ENST00000376643 FOXA1P55317 472 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 CTBP2P56545 445 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 FAM27E3Q08E93 113 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 HSPB3Q12988 150 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 LIPMQ5VYY2 423 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 PRSS57Q6UWY2 283 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 FAM214BQ7L5A3 538 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 STK32CQ86UX6 486 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 OR6K3Q8NGY3 331 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 GPR151Q8TDV0 419 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 ACTRT2Q8TDY3 377 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 ZBTB8AQ96BR9 441 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 MTERF3Q96E29 417 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 LRTM1Q9HBL6 345 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 ACSS1Q9NUB1 689 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-204ENST00000376643 OXSMQ9NWU1 459 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 NF1P21359 2839 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 KIAA1549Q9HCM3 1950 aa13.29□□□□□ -0.28
HDAC6-204ENST00000376643 C7orf72A4D263 438 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 UBFD1O14562 309 aaKnown RBP13.28□□□□□ -0.28
HDAC6-204ENST00000376643 COPEO14579 308 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 PLIN3O60664 434 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 SYNGR4O95473 234 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 CPA3P15088 417 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 MAPK1P28482 360 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 PRIM2P49643 509 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 NR1H2P55055 460 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 MANFP55145 182 aaKnown RBP13.28□□□□□ -0.28
HDAC6-204ENST00000376643 CLDN15P56746 228 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 SIRPAP78324 504 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 ACKR1Q16570 336 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDAC6-204ENST00000376643 VWA1Q6PCB0 445 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 LRIG3Q6UXM1 1119 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 BTLAQ7Z6A9 289 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 MARCH3Q86UD3 253 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 TDRPQ86YL5 185 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 NATD1Q8N6N6 113 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 WFDC11Q8NEX6 87 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 FNDC9Q8TBE3 224 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 MZB1Q8WU39 189 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 FIG4Q92562 907 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 HOXB13Q92826 284 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-204ENST00000376643 PIK3IP1Q96FE7 263 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 GMPPAQ96IJ6 420 aaPredicted RBP13.28□□□□□ -0.28
HDAC6-204ENST00000376643 WFIKKN1Q96NZ8 548 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 CCL19Q99731 98 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 BDH2Q9BUT1 245 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 OR10A4Q9H209 315 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 REEP4Q9H6H4 257 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 EQTNQ9NQ60 294 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 KLHL28Q9NXS3 571 aa13.28□□□□□ -0.28
HDAC6-204ENST00000376643 MED12Q93074 2177 aa13.27□□□□□ -0.28
HDAC6-204ENST00000376643 TMEM114B3SHH9 223 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 SCDO00767 359 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 AZIN1O14977 448 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 NME6O75414 186 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-204ENST00000376643 NKX2-2O95096 273 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 KRT16P08779 473 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 HOXB4P17483 251 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-204ENST00000376643 TBXA2RP21731 343 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 EIF1P41567 113 aaKnown RBP13.27□□□□□ -0.29
HDAC6-204ENST00000376643 EIF1AXP47813 144 aaKnown RBP13.27□□□□□ -0.29
HDAC6-204ENST00000376643 BEX5Q5H9J7 111 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 Q5PR19 223 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 ZNF474Q6S9Z5 364 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-204ENST00000376643 ESPNLQ6ZVH7 1005 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 SZRD1Q7Z422 152 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 EXOC3L1Q86VI1 746 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 GTPBP8Q8N3Z3 284 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-204ENST00000376643 ZNF527Q8NB42 609 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 NUP43Q8NFH3 380 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.27□□□□□ -0.29
HDAC6-204ENST00000376643 TXLNGYQ9BZA5 131 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 OPN3Q9H1Y3 402 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-204ENST00000376643 ZNF395Q9H8N7 513 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-204ENST00000376643 EML4Q9HC35 981 aaKnown RBP13.27□□□□□ -0.29
HDAC6-204ENST00000376643 TIGARQ9NQ88 270 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 UBQLN4Q9NRR5 601 aa13.27□□□□□ -0.29
HDAC6-204ENST00000376643 C6orf203Q9P0P8 240 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms