RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 NXF5Q9H1B4 397 aaKnown RBP11.89□□□□□ -0.51
CLCN6-205ENST00000376492 PIGMQ9H3S5 423 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 LRTM1Q9HBL6 345 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 MYNNQ9NPC7 610 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 TAS2R7Q9NYW3 318 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 KLHL14Q9P2G3 628 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 NDRG3Q9UGV2 375 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 ZNF639Q9UID6 485 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 ZDHHC2Q9UIJ5 367 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 UTS2RQ9UKP6 389 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 FIS1Q9Y3D6 152 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 PTGDR2Q9Y5Y4 395 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 ARID1AO14497 2285 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 A0A1W2PNV4 684 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 WDR91A4D1P6 747 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 TMEM233B4DJY2 109 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 LSM1O15116 133 aaKnown RBP11.88□□□□□ -0.51
CLCN6-205ENST00000376492 SMNDC1O75940 238 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLCN6-205ENST00000376492 ABCB1P08183 1280 aaPredicted RBP11.88□□□□□ -0.51
CLCN6-205ENST00000376492 PCSK2P16519 638 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 NT5EP21589 574 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 GPX3P22352 226 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 CCKARP32238 428 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 PTGDSP41222 190 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 STARP49675 285 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 RPP38P78345 283 aaKnown RBP11.88□□□□□ -0.51
CLCN6-205ENST00000376492 IRX1P78414 480 aaPredicted RBP11.88□□□□□ -0.51
CLCN6-205ENST00000376492 C2orf80Q0P641 193 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 RFTN2Q52LD8 501 aaPredicted RBP11.88□□□□□ -0.51
CLCN6-205ENST00000376492 IKBIPQ70UQ0 350 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 OR14L1PQ8NHC6 308 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 BCAS4Q8TDM0 211 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 WNT2BQ93097 391 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 HGDQ93099 445 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 OSBPL11Q9BXB4 747 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 OR10A5Q9H207 317 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 PFDN4Q9NQP4 134 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 SLC35C2Q9NQQ7 365 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 TMED5Q9Y3A6 229 aa11.88□□□□□ -0.51
CLCN6-205ENST00000376492 POLR3HQ9Y535 204 aaPredicted RBP11.88□□□□□ -0.51
CLCN6-205ENST00000376492 PLOD2O00469 737 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 NDUFAB1O14561 156 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 PIP5K1BO14986 540 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 ITM2AO43736 263 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 SNX3O60493 162 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 ICOSLGO75144 302 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 PPM1BO75688 479 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 CNOT4O95628 575 aaKnown RBP11.87□□□□□ -0.51
CLCN6-205ENST00000376492 TGM6O95932 706 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 NID1P14543 1247 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 TCEA1P23193 301 aaKnown RBP11.87□□□□□ -0.51
CLCN6-205ENST00000376492 GCKP35557 465 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 LHX2P50458 406 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 RPL14P50914 215 aaKnown RBP11.87□□□□□ -0.51
CLCN6-205ENST00000376492 DIO3P55073 304 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 DUSP2Q05923 314 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 XKR7Q5GH72 579 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 C6orf163Q5TEZ5 329 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 FAM180BQ6P0A1 224 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 VWA1Q6PCB0 445 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 FAM111BQ6SJ93 734 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 ZNF550Q7Z398 422 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 GRAMD2AQ8IUY3 354 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 DDIASQ8IXT1 998 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 CCDC116Q8IYX3 515 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 WDSUB1Q8N9V3 476 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 C17orf47Q8NEP4 570 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 ZNF675Q8TD23 568 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 ERP27Q96DN0 273 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 UCN2Q96RP3 112 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 SORT1Q99523 831 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 MED18Q9BUE0 208 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 OR2B2Q9GZK3 357 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 C20orf27Q9GZN8 174 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 MAT2BQ9NZL9 334 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 KLRF1Q9NZS2 232 aa11.87□□□□□ -0.51
CLCN6-205ENST00000376492 EXO1Q9UQ84 846 aaKnown RBP11.87□□□□□ -0.51
CLCN6-205ENST00000376492 RTTNQ86VV8 2226 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 SONP18583 2426 aaKnown RBP11.86□□□□□ -0.51
CLCN6-205ENST00000376492 MYO1GB0I1T2 1018 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 MSTNO14793 375 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 LYPLA1O75608 230 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-205ENST00000376492 HSPA4LO95757 839 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 FPR1P21462 350 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 CRYGSP22914 178 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 LOXP28300 417 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-205ENST00000376492 MPIP34949 423 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 MC3RP41968 323 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 PTH2RP49190 550 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 SEC24CP53992 1094 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 GFRA1P56159 465 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 PRSS53Q2L4Q9 553 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 ZNF628Q5EBL2 1059 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 ZNF474Q6S9Z5 364 aaPredicted RBP11.86□□□□□ -0.51
CLCN6-205ENST00000376492 ENPP6Q6UWR7 440 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 IFNEQ86WN2 208 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 ADCY4Q8NFM4 1077 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 AGR3Q8TD06 166 aa11.86□□□□□ -0.51
CLCN6-205ENST00000376492 EXOSC8Q96B26 276 aaKnown RBP11.86□□□□□ -0.51
CLCN6-205ENST00000376492 STARD4Q96DR4 205 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms