RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CCDC58Q4VC31 144 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 C1QTNF12Q5T7M4 302 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 HES5Q5TA89 166 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OAFQ86UD1 273 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 LRRC20Q8TCA0 184 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OSTF1Q92882 214 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CAMK1GQ96NX5 476 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FOXN4Q96NZ1 517 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ERMAPQ96PL5 475 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CACNG6Q9BXT2 260 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TRIM36Q9NQ86 728 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC27A6Q9Y2P4 619 aa13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 EXOSC1Q9Y3B2 195 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1B-201ENST00000376259 A0A1W2PQU0 124 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PCP4L1A6NKN8 68 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FBXO45P0C2W1 286 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CLUP10909 449 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SNRPBP14678 240 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 EDNRAP25101 427 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PDX1P52945 283 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 IFITM2Q01629 132 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CDK10Q15131 360 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC25A25Q6KCM7 469 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ZNF613Q6PF04 617 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GDPD1Q8N9F7 314 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 C1orf216Q8TAB5 229 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CREB3L4Q8TEY5 395 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 KXD1Q9BQD3 176 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SPHK1Q9NYA1 384 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MT-ND4P03905 459 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 C1orf61Q13536 156 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 LYPD8Q6UX82 237 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ARL14Q8N4G2 192 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SDR9C7Q8NEX9 313 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR52E1Q8NGJ3 308 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR52E2Q8NGJ4 325 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR13C2Q8NGS9 318 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SETD7Q8WTS6 366 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GINS4Q9BRT9 223 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FUZQ9BT04 418 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MARK1Q9P0L2 795 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SATB2Q9UPW6 733 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 A0A1W2PR48 441 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FABP7O15540 132 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 HIST1H1TP22492 207 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 DDX6P26196 483 aaKnown RBP eCLIP13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ITPKBP27987 946 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 RAB28P51157 221 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CCR6P51684 374 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 VSX2P58304 361 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CRYZQ08257 329 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 CDC20Q12834 499 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 FCN2Q15485 313 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 NDUFA9Q16795 377 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 HNRNPA1L2Q32P51 320 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SIMC1Q8NDZ2 872 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TRMT10AQ8TBZ6 339 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 TMEM163Q8TC26 289 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 AKAP1Q92667 903 aaKnown RBP eCLIP13.48□□□□□ -0.251e-8■■■■■ 37
TNFRSF1B-201ENST00000376259 NKD1Q969G9 470 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC25A46Q96AG3 418 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PRRC1Q96M27 445 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PTCHD1Q96NR3 888 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR52D1Q9H346 318 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PCDHGB2Q9Y5G2 931 aa13.48□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR2W5A6NFC9 320 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 EMC8O43402 210 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 HMGN1P05114 100 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ZNF888P0CJ79 500 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ACP2P11117 423 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MYOGP15173 224 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PCSK2P16519 638 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ATF4P18848 351 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GDI1P31150 447 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 BMP8BP34820 402 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 BMP8AQ7Z5Y6 402 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 C4orf36Q96KX1 117 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 THAP7Q9BT49 309 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR10A4Q9H209 315 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 KCMF1Q9P0J7 381 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MYEF2Q9P2K5 600 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 DKK3Q9UBP4 350 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 MEIS3P1A6NDR6 274 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 GREM1O60565 184 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ADH7P40394 386 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 P2RY2P41231 377 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PDGFRLQ15198 375 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ZNF79Q15937 498 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PLK5Q496M5 336 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 PLPP6Q8IY26 295 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SLC44A3Q8N4M1 653 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 OR56A1Q8NGH5 318 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 SIPA1Q96FS4 1042 aa13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 HINT3Q9NQE9 182 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1B-201ENST00000376259 USP34Q70CQ2 3546 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 POM121CA8CG34 1229 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 LALBAP00709 142 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 IL1AP01583 271 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 ACVR2AP27037 513 aa13.46□□□□□ -0.25
TNFRSF1B-201ENST00000376259 BCL6P41182 706 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms