RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 RRAGDQ9NQL2 400 aaPredicted RBP20.86■□□□□ 0.93
C9orf47-202ENST00000375850 PLSCR4Q9NRQ2 329 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 GLRX2Q9NS18 164 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 DCDC2Q9UHG0 476 aa20.86■□□□□ 0.93
C9orf47-202ENST00000375850 C17orf51A8MQB3 221 aa20.85■□□□□ 0.93
C9orf47-202ENST00000375850 H0YC42 278 aa20.85■□□□□ 0.93
C9orf47-202ENST00000375850 H7C1Q1 480 aa20.85■□□□□ 0.93
C9orf47-202ENST00000375850 ANGPTL1O95841 491 aa20.85■□□□□ 0.93
C9orf47-202ENST00000375850 IL11P20809 199 aa20.85■□□□□ 0.93
C9orf47-202ENST00000375850 NR1H2P55055 460 aa20.85■□□□□ 0.93
C9orf47-202ENST00000375850 TPD52P55327 224 aaPredicted RBP20.85■□□□□ 0.93
C9orf47-202ENST00000375850 TMEM44Q2T9K0 475 aa20.85■□□□□ 0.93
C9orf47-202ENST00000375850 FAM219BQ5XKK7 198 aa20.85■□□□□ 0.93
C9orf47-202ENST00000375850 ZNF764Q96H86 408 aaPredicted RBP20.85■□□□□ 0.93
C9orf47-202ENST00000375850 PRRG4Q9BZD6 226 aa20.85■□□□□ 0.93
C9orf47-202ENST00000375850 OR10A4Q9H209 315 aa20.85■□□□□ 0.93
C9orf47-202ENST00000375850 UTS2O95399 124 aa20.84■□□□□ 0.93
C9orf47-202ENST00000375850 PLGP00747 810 aaPredicted RBP20.84■□□□□ 0.93
C9orf47-202ENST00000375850 NGFRP08138 427 aa20.84■□□□□ 0.93
C9orf47-202ENST00000375850 GCAP28676 217 aa20.84■□□□□ 0.93
C9orf47-202ENST00000375850 PLEKHM3Q6ZWE6 761 aa20.84■□□□□ 0.93
C9orf47-202ENST00000375850 ZNF550Q7Z398 422 aa20.84■□□□□ 0.93
C9orf47-202ENST00000375850 WDR75Q8IWA0 830 aaKnown RBP20.84■□□□□ 0.93
C9orf47-202ENST00000375850 NOA1Q8NC60 698 aaKnown RBP20.84■□□□□ 0.93
C9orf47-202ENST00000375850 RTN4RQ9BZR6 473 aa20.84■□□□□ 0.93
C9orf47-202ENST00000375850 KLHL4Q9C0H6 718 aa20.84■□□□□ 0.93
C9orf47-202ENST00000375850 FLRT3Q9NZU0 649 aa20.84■□□□□ 0.93
C9orf47-202ENST00000375850 MCTS1Q9ULC4 181 aaKnown RBP20.84■□□□□ 0.93
C9orf47-202ENST00000375850 ALG1L2C9J202 215 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 CRCPO75575 148 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 PAX1P15863 534 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 LOXP28300 417 aaPredicted RBP20.83■□□□□ 0.93
C9orf47-202ENST00000375850 LCN1P31025 176 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 GABRA3P34903 492 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 CTBP2P56545 445 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 NOXRED1Q6NXP6 359 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 GGNQ86UU5 652 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 HOMEZQ8IX15 550 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 CCNYL1Q8N7R7 359 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 OR5M1Q8NGP8 315 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 CEP70Q8NHQ1 597 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 PPP1R14CQ8TAE6 165 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 HOXB13Q92826 284 aaPredicted RBP20.83■□□□□ 0.93
C9orf47-202ENST00000375850 PERPQ96FX8 193 aa20.83■□□□□ 0.93
C9orf47-202ENST00000375850 ZC3HAV1LQ96H79 300 aaKnown RBP20.83■□□□□ 0.93
C9orf47-202ENST00000375850 PSMC3IPQ9P2W1 217 aaPredicted RBP20.83■□□□□ 0.93
C9orf47-202ENST00000375850 POLR3HQ9Y535 204 aaPredicted RBP20.83■□□□□ 0.93
C9orf47-202ENST00000375850 C7orf72A4D263 438 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 EIF1AYO14602 144 aaKnown RBP20.82■□□□□ 0.92
C9orf47-202ENST00000375850 SS18L1O75177 396 aaPredicted RBP20.82■□□□□ 0.92
C9orf47-202ENST00000375850 AQP8O94778 261 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 MYL2P10916 166 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 PRPS2P11908 318 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 EIF1AXP47813 144 aaKnown RBP20.82■□□□□ 0.92
C9orf47-202ENST00000375850 RFX3P48380 749 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 SLC29A2Q14542 456 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 PRSS53Q2L4Q9 553 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 BEND4Q6ZU67 534 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 STK32CQ86UX6 486 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 MISPQ8IVT2 679 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 GTPBP8Q8N3Z3 284 aaPredicted RBP20.82■□□□□ 0.92
C9orf47-202ENST00000375850 CDRT4Q8N9R6 151 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 ZFP28Q8NHY6 868 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 ACTRT2Q8TDY3 377 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 ZBTB8AQ96BR9 441 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 HS3ST6Q96QI5 342 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 CXorf56Q9H5V9 222 aa20.82■□□□□ 0.92
C9orf47-202ENST00000375850 NPIPB8E9PQR5 432 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 UBFD1O14562 309 aaKnown RBP20.81■□□□□ 0.92
C9orf47-202ENST00000375850 RIPK2O43353 540 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 GLRA3O75311 464 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 NKX2-2O95096 273 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 SYNGR4O95473 234 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 PRPH2P23942 346 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 FOXA1P55317 472 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 GRAMD1BQ3KR37 738 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 PDSS1Q5T2R2 415 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 GTF2IRD2BQ6EKJ0 949 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 ZYG11AQ6WRX3 759 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 SH2D5Q6ZV89 423 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 ESPNLQ6ZVH7 1005 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 GTF2IRD2Q86UP8 949 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 GPR151Q8TDV0 419 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 TMEM171Q8WVE6 324 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 C16orf45Q96MC5 204 aaPredicted RBP20.81■□□□□ 0.92
C9orf47-202ENST00000375850 ARID1AO14497 2285 aa20.81■□□□□ 0.92
C9orf47-202ENST00000375850 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.8■□□□□ 0.92
C9orf47-202ENST00000375850 ADAMDEC1O15204 470 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 PDPK1O15530 556 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 NDUFB5O43674 189 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 UROSP10746 265 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 PYGBP11216 843 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 ME2P23368 584 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 GPC1P35052 558 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 MAP3K8P41279 467 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 PTH2RP49190 550 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 RAC1P63000 192 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 PPP2R2BQ00005 443 aa20.8■□□□□ 0.92
C9orf47-202ENST00000375850 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.8■□□□□ 0.92
C9orf47-202ENST00000375850 EXOC3L2Q2M3D2 409 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms