RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 METTL15A6NJ78 407 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 D6RAR5 112 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 EPPINO95925 133 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 PROS1P07225 676 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 ADRA2AP08913 450 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 NR2F6P10588 404 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 PDX1P52945 283 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 EPHA4P54764 986 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 GPLD1P80108 840 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 ALDH6A1Q02252 535 aaKnown RBP14.48□□□□□ -0.09
CCDC40-202ENST00000374876 TSTQ16762 297 aaKnown RBP14.48□□□□□ -0.09
CCDC40-202ENST00000374876 TIMM50Q3ZCQ8 353 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 TMEM201Q5SNT2 666 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 SNAP47Q5SQN1 464 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 MEDAGQ5VYS4 303 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 ASPGQ86U10 573 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 TCEANCQ8N8B7 351 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 SLC22A18Q96BI1 424 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 DACH2Q96NX9 599 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 FCRL4Q96PJ5 515 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 MROQ9BYG7 248 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 C6orf62Q9GZU0 229 aaPredicted RBP14.48□□□□□ -0.09
CCDC40-202ENST00000374876 QRSL1Q9H0R6 528 aaKnown RBP14.48□□□□□ -0.09
CCDC40-202ENST00000374876 MAN2C1Q9NTJ4 1040 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 KLHL3Q9UH77 587 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 RPL36Q9Y3U8 105 aaKnown RBP14.48□□□□□ -0.09
CCDC40-202ENST00000374876 PCDHGA3Q9Y5H0 932 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 KCNE3Q9Y6H6 103 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 OR6C74A6NCV1 312 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 CCRL2O00421 344 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 DUX1O43812 170 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 CSO75390 466 aaKnown RBP14.48□□□□□ -0.09
CCDC40-202ENST00000374876 SLC35G6P0C7Q6 338 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 ZNF888P0CJ79 500 aaPredicted RBP14.48□□□□□ -0.09
CCDC40-202ENST00000374876 MMP11P24347 488 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 CSTF2P33240 577 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCDC40-202ENST00000374876 PPP1CAP62136 330 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 OXA1LQ15070 435 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 CEBPEQ15744 281 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 SOWAHCQ53LP3 525 aaPredicted RBP14.48□□□□□ -0.09
CCDC40-202ENST00000374876 ZNF311Q5JNZ3 666 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 ATAD3BQ5T9A4 648 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 CD300LDQ6UXZ3 194 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 VN1R4Q7Z5H5 301 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 ZER1Q7Z7L7 766 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 SNX29P2Q8IUI4 249 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 IQCF1Q8N6M8 205 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 ZFPM2Q8WW38 1151 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 TMEM80Q96HE8 168 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 ZNF681Q96N22 645 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 CENPOQ9BU64 300 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 ANKRA2Q9H9E1 313 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 CTPS2Q9NRF8 586 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 TVP23BQ9NYZ1 205 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 CALML5Q9NZT1 146 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 LIPT1Q9Y234 373 aa14.48□□□□□ -0.09
CCDC40-202ENST00000374876 COL27A1Q8IZC6 1860 aaPredicted RBP14.47□□□□□ -0.09
CCDC40-202ENST00000374876 ASNA1O43681 348 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 ALPPP05187 535 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 BCAP31P51572 246 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 GFERP55789 205 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 ISXQ2M1V0 245 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 C16orf62Q7Z3J2 963 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 SLC34A3Q8N130 599 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 MORN4Q8NDC4 146 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 RCBTB1Q8NDN9 531 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 KAT2AQ92830 837 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 RNF167Q9H6Y7 350 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 HRASLS2Q9NWW9 162 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 CCDC59Q9P031 241 aaKnown RBP14.47□□□□□ -0.09
CCDC40-202ENST00000374876 ENTPD2Q9Y5L3 495 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 A3GALT2U3KPV4 340 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 CACNA1AO00555 2505 aa14.47□□□□□ -0.09
CCDC40-202ENST00000374876 A8MU76 341 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 TP53P04637 393 aaPredicted RBP14.46□□□□□ -0.09
CCDC40-202ENST00000374876 POLR2CP19387 275 aaPredicted RBP14.46□□□□□ -0.09
CCDC40-202ENST00000374876 MAN2A2P49641 1150 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 PPP5CP53041 499 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 TAS2R41P59536 307 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 IFITM3Q01628 133 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 CHRNEQ04844 493 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 SQSTM1Q13501 440 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 NCF4Q15080 339 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 LTB4RQ15722 352 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 OCLNQ16625 522 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 PHF19Q5T6S3 580 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 MFSD4BQ5TF39 518 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 C1orf94Q6P1W5 598 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 TMEM71Q6P5X7 295 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 MINDY2Q8NBR6 621 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 NT5CQ8TCD5 201 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 TRNT1Q96Q11 434 aaKnown RBP14.46□□□□□ -0.09
CCDC40-202ENST00000374876 TSSK6Q9BXA6 273 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 ACTRT3Q9BYD9 372 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 SLC38A1Q9H2H9 487 aa14.46□□□□□ -0.09
CCDC40-202ENST00000374876 SNRNP200O75643 2136 aaKnown RBP14.46□□□□□ -0.1
CCDC40-202ENST00000374876 ASPMQ8IZT6 3477 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 NCOR2Q9Y618 2525 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 IGHV5-10-1A0A0J9YXX1 117 aa14.46□□□□□ -0.1
CCDC40-202ENST00000374876 SYT5O00445 386 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms