RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TMEM173Q86WV6 379 aaPredicted RBP13.53□□□□□ -0.24
TRAF1-201ENST00000373887 DEFB123Q8N688 67 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 FAM71F1Q96KD3 344 aaPredicted RBP13.53□□□□□ -0.24
TRAF1-201ENST00000373887 CACNG6Q9BXT2 260 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 CWH43Q9H720 699 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 ADAMTS6Q9UKP5 1117 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 SYT7O43581 403 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 NCS1P62166 190 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 RPS26P11Q5JNZ5 115 aaPredicted RBP13.53□□□□□ -0.24
TRAF1-201ENST00000373887 ANKRD13BQ86YJ7 626 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 PTERQ96BW5 349 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 TP53TG5Q9Y2B4 290 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 PTRH2Q9Y3E5 179 aaKnown RBP13.53□□□□□ -0.24
TRAF1-201ENST00000373887 FGF3P11487 239 aaPredicted RBP13.53□□□□□ -0.24
TRAF1-201ENST00000373887 CD6P30203 668 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 ARG2P78540 354 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 BORAQ6PGQ7 559 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 C6orf120Q7Z4R8 191 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 HAS2Q92819 552 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 DNAJB13P59910 316 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 PARS2Q7L3T8 475 aaKnown RBP13.53□□□□□ -0.24
TRAF1-201ENST00000373887 TMEM150AQ86TG1 271 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 OR52B6Q8NGF0 335 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 CCDC106Q9BWC9 280 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 RHBDD3Q9Y3P4 386 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 C2orf72A6NCS6 295 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 A8MXE2 369 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 F5H5P2 479 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 MT-CO2P00403 227 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 CERS1P27544 350 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 FOLR3P41439 243 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 FGL2Q14314 439 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 ZNF423Q2M1K9 1284 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 C22orf15Q8WYQ4 148 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 DDIT4LQ96D03 193 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 SYT3Q9BQG1 590 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 SAGE1Q9NXZ1 904 aa13.53□□□□□ -0.24
TRAF1-201ENST00000373887 CXXC1Q9P0U4 656 aaPredicted RBP13.53□□□□□ -0.24
TRAF1-201ENST00000373887 ITGB8P26012 769 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 EIF2B1Q14232 305 aaKnown RBP13.52□□□□□ -0.24
TRAF1-201ENST00000373887 C15orf39Q6ZRI6 1047 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 ZC3H3Q8IXZ2 948 aaKnown RBP13.52□□□□□ -0.24
TRAF1-201ENST00000373887 CCDC71LQ8N9Z2 235 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 SLC2A12Q8TD20 617 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 MMP28Q9H239 520 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 PISDQ9UG56 409 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 PCYT1BQ9Y5K3 369 aaPredicted RBP13.52□□□□□ -0.24
TRAF1-201ENST00000373887 NUP98P52948 1817 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 TOPAZ1Q8N9V7 1692 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 NPC1O15118 1278 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 GPR39O43194 453 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 CAPNS1P04632 268 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 CD79AP11912 226 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 PORP16435 677 aaPredicted RBP13.52□□□□□ -0.24
TRAF1-201ENST00000373887 CHATP28329 748 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 GBX1Q14549 363 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 GRM7Q14831 915 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 TECRLQ5HYJ1 363 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 TLDC1Q6P9B6 456 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 PM20D2Q8IYS1 436 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 CNOT9Q92600 299 aaKnown RBP13.52□□□□□ -0.24
TRAF1-201ENST00000373887 UNKLQ9H9P5 680 aaKnown RBP13.52□□□□□ -0.24
TRAF1-201ENST00000373887 PDLIM7Q9NR12 457 aa13.52□□□□□ -0.24
TRAF1-201ENST00000373887 TEX10Q9NXF1 929 aaPredicted RBP13.52□□□□□ -0.24
TRAF1-201ENST00000373887 C1orf226A1L170 272 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 OPN1LWP04000 364 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 BMXP51813 675 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 NPRL3Q12980 569 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF578Q96N58 590 aaPredicted RBP13.52□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF382Q96SR6 550 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 ZNF559Q9BR84 538 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 POPDC3Q9HBV1 291 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 NUDT21O43809 227 aaKnown RBP13.52□□□□□ -0.25
TRAF1-201ENST00000373887 TFP02787 698 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 PNMTP11086 282 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 PTPRRQ15256 657 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 SPATS1Q496A3 300 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 METTL2BQ6P1Q9 378 aaKnown RBP13.52□□□□□ -0.25
TRAF1-201ENST00000373887 ARL11Q969Q4 196 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 VRK1Q99986 396 aaPredicted RBP13.52□□□□□ -0.25
TRAF1-201ENST00000373887 CRB3Q9BUF7 120 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 SORBS1Q9BX66 1292 aaKnown RBP13.52□□□□□ -0.25
TRAF1-201ENST00000373887 SAMD10Q9BYL1 202 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 KIAA0355O15063 1070 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 SC5DO75845 299 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 TGM6O95932 706 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 PAHP00439 452 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 RHCEP18577 417 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 CSNK1EP49674 416 aaKnown RBP13.52□□□□□ -0.25
TRAF1-201ENST00000373887 FGFBP1Q14512 234 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 UNC50Q53HI1 259 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 ABHD17BQ5VST6 288 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 MAL2Q969L2 176 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 CXCL16Q9H2A7 254 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 FKRPQ9H9S5 495 aa13.52□□□□□ -0.25
TRAF1-201ENST00000373887 K7EPK0 472 aa13.51□□□□□ -0.25
TRAF1-201ENST00000373887 AIPO00170 330 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms