RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 COL21A1Q96P44 957 aa17.4■□□□□ 0.38
TRAPPC3-204ENST00000373166 C1orf50Q9BV19 199 aa17.4■□□□□ 0.38
TRAPPC3-204ENST00000373166 OSBPL11Q9BXB4 747 aa17.4■□□□□ 0.38
TRAPPC3-204ENST00000373166 KLRF1Q9NZS2 232 aa17.4■□□□□ 0.38
TRAPPC3-204ENST00000373166 SH3BP4Q9P0V3 963 aa17.4■□□□□ 0.38
TRAPPC3-204ENST00000373166 RAP2CQ9Y3L5 183 aa17.4■□□□□ 0.38
TRAPPC3-204ENST00000373166 PRAMEF25A6NGN4 478 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 OR6C70A6NIJ9 312 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 UPK1AO00322 258 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 UGT2B11O75310 529 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 NME6O75414 186 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 RCBTB2O95199 551 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 CT45A8P0DMV1 189 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 CT45A9P0DMV2 189 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 BGNP21810 368 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 EEF1A1P68104 462 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 PPP2R2BQ00005 443 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 EFR3AQ14156 821 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 MPP2Q14168 576 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 PDCD2Q16342 344 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 CT45A2Q5DJT8 189 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 C6orf136Q5SQH8 315 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 EEF1A1P5Q5VTE0 462 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 SLC30A6Q6NXT4 461 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 TMEM81Q6P7N7 255 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 NPSR1Q6W5P4 371 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 ZNF551Q7Z340 670 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 YRDCQ86U90 279 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 ZNF781Q8N8C0 355 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 FAM83FQ8NEG4 500 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 OR1J4Q8NGS1 313 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 CIDECQ96AQ7 238 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 TMCO6Q96DC7 493 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 SLC35A4Q96G79 324 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 REPIN1Q9BWE0 567 aaKnown RBP17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 ACBD3Q9H3P7 528 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 PIGMQ9H3S5 423 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 NCKAP5O14513 1909 aa17.39■□□□□ 0.37
TRAPPC3-204ENST00000373166 TMEM120BA0PK00 339 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 GNB5O14775 395 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 SMAD7O15105 426 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 SCAMP2O15127 329 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 PSMG1O95456 288 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 PRPS2P11908 318 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 PTPN6P29350 595 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 SLC1A6P48664 564 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 DIO3P55073 304 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 MRPS22P82650 360 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 MAD2L1Q13257 205 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 STX3Q13277 289 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 SNTA1Q13424 505 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 ZNF385BQ569K4 471 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 LARP4Q71RC2 724 aaKnown RBP eCLIP17.38■□□□□ 0.373e-6■■□□□ 11.9
TRAPPC3-204ENST00000373166 INTS12Q96CB8 462 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 NODALQ96S42 347 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 TUBA1CQ9BQE3 449 aa17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 ACSS1Q9NUB1 689 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-204ENST00000373166 H0Y3Z8 333 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 FPR1P21462 350 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 RPL14P50914 215 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 MANFP55145 182 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 PSG6Q00889 435 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 GAB1Q13480 694 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 IL23RQ5VWK5 629 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 DESI1Q6ICB0 168 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 ENPP6Q6UWR7 440 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 ANGPTL8Q6UXH0 198 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 CXXC5Q7LFL8 322 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 SZRD1Q7Z422 152 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 YTHDF3Q7Z739 585 aaKnown RBP17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 WNT2BQ93097 391 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 ADOQ96SZ5 270 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 Q9N2J8 555 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 ATAD3AQ9NVI7 634 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 NKIRAS1Q9NYS0 192 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 ATP6V1HQ9UI12 483 aa17.37■□□□□ 0.37
TRAPPC3-204ENST00000373166 A8MXE2 369 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 TSPAN2O60636 221 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 FRKP42685 505 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 PNLIPRP2P54317 469 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 MAGOHP61326 146 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 PTGR1Q14914 329 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 MGARPQ8TDB4 240 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 EFHD2Q96C19 240 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 PPP1R36Q96LQ0 422 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 MS4A4EQ96PG1 132 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 UCN2Q96RP3 112 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 SORT1Q99523 831 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 PRPF18Q99633 342 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 C3orf14Q9HBI5 128 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 TMBIM4Q9HC24 238 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 GALNT9Q9HCQ5 603 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 EQTNQ9NQ60 294 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 NOP53Q9NZM5 478 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 C6orf203Q9P0P8 240 aaPredicted RBP17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 MRTO4Q9UKD2 239 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 TESMINQ9Y4I5 508 aa17.36■□□□□ 0.37
TRAPPC3-204ENST00000373166 TTC36A6NLP5 189 aa17.35■□□□□ 0.37
TRAPPC3-204ENST00000373166 INAFM1C9JVW0 142 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms