RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ZNF45Q02386 682 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 CD300CQ08708 224 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 PRICKLE4Q2TBC4 344 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 KIAA0895LQ68EN5 471 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 ZNF619Q8N2I2 560 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 ZNF655Q8N720 491 aaPredicted RBP17.43■□□□□ 0.38
USP49-202ENST00000373010 GPR151Q8TDV0 419 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 RERGLQ9H628 205 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 CAPN10Q9HC96 672 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 FGF20Q9NP95 211 aaPredicted RBP17.43■□□□□ 0.38
USP49-202ENST00000373010 PRDM9Q9NQV7 894 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 SNTG1Q9NSN8 517 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 MRPS18AQ9NVS2 196 aaKnown RBP17.43■□□□□ 0.38
USP49-202ENST00000373010 SPIN1Q9Y657 262 aaPredicted RBP17.43■□□□□ 0.38
USP49-202ENST00000373010 HYKKA2RU49 373 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 KDM4EB2RXH2 506 aaPredicted RBP17.43■□□□□ 0.38
USP49-202ENST00000373010 RDH16O75452 317 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 STX11O75558 287 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 HTR2AP28223 471 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 CD79BP40259 229 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 TGM4P49221 684 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 MGAT2Q10469 447 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 RAB40BQ12829 278 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 MINDY4Q4G0A6 757 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 EXOSC6Q5RKV6 272 aaKnown RBP17.43■□□□□ 0.38
USP49-202ENST00000373010 MRPL2Q5T653 305 aaKnown RBP17.43■□□□□ 0.38
USP49-202ENST00000373010 ZNF620Q6ZNG0 422 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 DGAT2L6Q6ZPD8 337 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 GATAD2BQ8WXI9 593 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 OSTF1Q92882 214 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 CCDC3Q9BQI4 270 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 GPR174Q9BXC1 333 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 MIR1-1HGQ9H1L0 117 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 IL20Q9NYY1 176 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 CLCA2Q9UQC9 943 aa17.43■□□□□ 0.38
USP49-202ENST00000373010 YARS2Q9Y2Z4 477 aaKnown RBP17.43■□□□□ 0.38
USP49-202ENST00000373010 KIR2DS5A0A0G2JLQ3 304 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 A0A0G2JNG1 304 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 SPTY2D1-AS1A0A0U1RR47 76 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 GXYLT2A0PJZ3 443 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 SAGE2PA6NJ88 616 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 KIR2DS3K7RE56 304 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 SURF4O15260 269 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 PLOD3O60568 738 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 SLC2A10O95528 541 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 THBS1P07996 1170 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 CTSEP14091 401 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 ST6GAL1P15907 406 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 FUT1P19526 365 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 SRSF5Q13243 272 aaKnown RBP17.42■□□□□ 0.38
USP49-202ENST00000373010 KIR2DS5Q14953 304 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 ZNF181Q2M3W8 571 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 EIPR1Q53HC9 387 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 WDR88Q6ZMY6 472 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 GDPGP1Q6ZNW5 385 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 CADM3Q8N126 398 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 OR9Q1Q8NGQ5 310 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 TM9SF4Q92544 642 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 PRSS27Q9BQR3 290 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 ZNF229Q9UJW7 825 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 SSR3Q9UNL2 185 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 TRIOO75962 3097 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 A0A087WV62 115 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 FAM221BA6H8Z2 402 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 OR5K3A6NET4 321 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 ZNF670-ZNF695F2Z2N8 137 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 MED26O95402 600 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 RPS4Y1P22090 263 aaKnown RBP17.42■□□□□ 0.38
USP49-202ENST00000373010 CD97P48960 835 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 WNT4P56705 351 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 CDRT4Q8N9R6 151 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 BBS1Q8NFJ9 593 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 OR9A4Q8NGU2 314 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 RNF217Q8TC41 542 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 ANKRD9Q96BM1 317 aaPredicted RBP17.42■□□□□ 0.38
USP49-202ENST00000373010 SAMD8Q96LT4 415 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 RBCK1Q9BYM8 510 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 SMURF1Q9HCE7 757 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 C2orf42Q9NWW7 574 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 KLHL3Q9UH77 587 aa17.42■□□□□ 0.38
USP49-202ENST00000373010 PLD2O14939 933 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 DBIP07108 87 aaKnown RBP17.41■□□□□ 0.38
USP49-202ENST00000373010 CPEP16870 476 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 GABRA3P34903 492 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 CDH11P55287 796 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 HHEXQ03014 270 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 MXD1Q05195 221 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 PGGHGQ32M88 737 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 ZC3H14Q6PJT7 736 aaKnown RBP17.41■□□□□ 0.38
USP49-202ENST00000373010 ZAR1Q86SH2 424 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 CCDC190Q86UF4 302 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 RANBP3LQ86VV4 465 aaPredicted RBP17.41■□□□□ 0.38
USP49-202ENST00000373010 POC5Q8NA72 575 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 HTRA1Q92743 480 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 NELL2Q99435 816 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 PHOX2BQ99453 314 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 TPK1Q9H3S4 243 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 DUSP22Q9NRW4 184 aa17.41■□□□□ 0.38
USP49-202ENST00000373010 CHCHD3Q9NX63 227 aaKnown RBP17.41■□□□□ 0.38
USP49-202ENST00000373010 PCDHGB6Q9Y5F9 930 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms