RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 TBC1D17Q9HA65 648 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 PRTFDC1Q9NRG1 225 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 HRO43593 1189 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 KCNK2O95069 426 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 NADKO95544 446 aaPredicted RBP16.61■□□□□ 0.25
CTSA-204ENST00000372484 FPR3P25089 353 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 TGFBR1P36897 503 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 GPR4P46093 362 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 RGS6P49758 472 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 ZNHIT3Q15649 155 aaPredicted RBP16.61■□□□□ 0.25
CTSA-204ENST00000372484 SYT14P1Q58G82 188 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 SLC25A30Q5SVS4 291 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 GARNL3Q5VVW2 1013 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 ZC3H14Q6PJT7 736 aaKnown RBP16.61■□□□□ 0.25
CTSA-204ENST00000372484 OR8D4Q8NGM9 314 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 ADAMTS18Q8TE60 1221 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 PMM1Q92871 262 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 ZDHHC12Q96GR4 267 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 TMEM80Q96HE8 168 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 POLE3Q9NRF9 147 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 EML5Q05BV3 1969 aa16.61■□□□□ 0.25
CTSA-204ENST00000372484 BLACEA4D250 179 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 TRAPPC13A5PLN9 417 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 OR2W5A6NFC9 320 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 PIAS2O75928 621 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 SOX30O94993 753 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 CALRP27797 417 aaKnown RBP16.6■□□□□ 0.25
CTSA-204ENST00000372484 SERPINB10P48595 397 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 FNTBP49356 437 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 C21orf59P57076 290 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 BTG2P78543 158 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 PSG6Q00889 435 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 NR1D2Q14995 579 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 NCF4Q15080 339 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 FLYWCH1Q4VC44 716 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 TCTE1Q5JU00 501 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 CLEC12AQ5QGZ9 265 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 SLC36A4Q6YBV0 504 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 ADCK1Q86TW2 530 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 CACTIN-AS1Q8N1I8 211 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 HOXB13Q92826 284 aaPredicted RBP16.6■□□□□ 0.25
CTSA-204ENST00000372484 DGAT2Q96PD7 388 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 MGLLQ99685 303 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 FOLH1BQ9HBA9 442 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 NLGN3Q9NZ94 848 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 LRIT1Q9P2V4 623 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 HRKO00198 91 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 PIP5K1CO60331 668 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 RPLP0P05388 317 aaKnown RBP16.6■□□□□ 0.25
CTSA-204ENST00000372484 PTNP21246 168 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 HTR2AP28223 471 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 SSTR4P31391 388 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 CSTF2P33240 577 aaKnown RBP eCLIP16.6■□□□□ 0.25
CTSA-204ENST00000372484 STAT5AP42229 794 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 EMDP50402 254 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 EFNB1P98172 346 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 AP1ARQ63HQ0 302 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 ZAR1Q86SH2 424 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 SLC34A3Q8N130 599 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 SLC15A4Q8N697 577 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 AHCYL2Q96HN2 611 aaKnown RBP16.6■□□□□ 0.25
CTSA-204ENST00000372484 ZNF582Q96NG8 517 aaPredicted RBP16.6■□□□□ 0.25
CTSA-204ENST00000372484 SLC38A2Q96QD8 506 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 LMF2Q9BU23 707 aaKnown RBP16.6■□□□□ 0.25
CTSA-204ENST00000372484 ZBTB20Q9HC78 741 aaPredicted RBP16.6■□□□□ 0.25
CTSA-204ENST00000372484 KRCC1Q9NPI7 259 aaPredicted RBP16.6■□□□□ 0.25
CTSA-204ENST00000372484 ERGIC3Q9Y282 383 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 RNF215Q9Y6U7 377 aa16.6■□□□□ 0.25
CTSA-204ENST00000372484 ATXN8OSP0DMR3 200 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 GNSP15586 552 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 MAOAP21397 527 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 OPRL1P41146 370 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 IGLV3-21P80748 117 aaPredicted RBP16.59■□□□□ 0.25
CTSA-204ENST00000372484 OR1Q1Q15612 314 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 TMEM163Q8TC26 289 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 RNF217Q8TC41 542 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 OSTF1Q92882 214 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 PRRG3Q9BZD7 231 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 POLR2J2Q9GZM3 115 aaKnown RBP16.59■□□□□ 0.25
CTSA-204ENST00000372484 SPRTNQ9H040 489 aaPredicted RBP16.59■□□□□ 0.25
CTSA-204ENST00000372484 TBC1D23Q9NUY8 699 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 EPHA6Q9UF33 1036 aa16.59■□□□□ 0.25
CTSA-204ENST00000372484 AFF3P51826 1226 aaKnown RBP16.58■□□□□ 0.25
CTSA-204ENST00000372484 EPHA4P54764 986 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 ZNF267Q14586 743 aaPredicted RBP16.58■□□□□ 0.25
CTSA-204ENST00000372484 ANKDD1AQ495B1 522 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 MRGPREQ86SM8 312 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 ZNF614Q8N883 585 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 OR4N2Q8NGD1 307 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 OR51Q1Q8NH59 317 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 CDX2Q99626 313 aaPredicted RBP16.58■□□□□ 0.25
CTSA-204ENST00000372484 CNPPD1Q9BV87 410 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 RAB33BQ9H082 229 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 DCSTAMPQ9H295 470 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 IL20Q9NYY1 176 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 CLEC2DQ9UHP7 191 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 COLQQ9Y215 455 aaPredicted RBP16.58■□□□□ 0.25
CTSA-204ENST00000372484 GPR52Q9Y2T5 361 aa16.58■□□□□ 0.25
CTSA-204ENST00000372484 TMEM184BQ9Y519 407 aaPredicted RBP16.58■□□□□ 0.25
CTSA-204ENST00000372484 LOC100506127A0A0U1RQW1 187 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms