RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 CXCL2P19875 107 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 SDC2P34741 201 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 INPP1P49441 399 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 RBP2P50120 134 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CCL23P55773 120 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 SMCO1Q147U7 214 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 SYTL3Q4VX76 610 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 UNC50Q53HI1 259 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CARD16Q5EG05 197 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 C3orf38Q5JPI3 329 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 ADGRF1Q5T601 910 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 OR5M10Q6IEU7 315 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CHST9Q7L1S5 443 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 GLT6D1Q7Z4J2 308 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 SPATA19Q7Z5L4 167 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 TRIM69Q86WT6 500 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CBLN2Q8IUK8 224 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 SVBPQ8N300 66 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 RYBPQ8N488 228 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 MDGA1Q8NFP4 955 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 BPIFCQ8NFQ6 507 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 OR4K2Q8NGD2 314 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 OR8J3Q8NGG0 315 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 OR2T35Q8NGX2 323 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 ZNF461Q8TAF7 563 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 RHEBL1Q8TAI7 183 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 RXFP4Q8TDU9 374 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 CYB5D2Q8WUJ1 264 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 IGSF21Q96ID5 467 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 MEGF10Q96KG7 1140 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 TEX37Q96LM6 180 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 GABARAPL3Q9BY60 117 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 GPR61Q9BZJ8 451 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 ZFP57Q9NU63 452 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 DCAF13Q9NV06 445 aaKnown RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 AIG1Q9NVV5 245 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 AKAP7Q9P0M2 348 aaPredicted RBP8.31□□□□□ -1.08
ATG4A-203ENST00000372232 DUX4Q9UBX2 424 aa8.31□□□□□ -1.08
ATG4A-203ENST00000372232 PLSCR5A0PG75 271 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 MARCH11A6NNE9 402 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 NEDD8-MDP1E9PL57 170 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 PIP5K1BO14986 540 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 TSPAN3O60637 253 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 VPS4BO75351 444 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 UBXN7O94888 489 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 MBP02144 154 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 FGF4P08620 206 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 RD3LP0DJH9 198 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 MTHFD2P13995 350 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 HGFP14210 728 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 GABRB1P18505 474 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 C5AR1P21730 350 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 PXNP49023 591 aaPredicted RBP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 POLR2JP52435 117 aaKnown RBP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 MTPNP58546 118 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 ST3GAL4Q11206 333 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 HNRNPA0Q13151 305 aaKnown RBP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 SLC9A5Q14940 896 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 MED22Q15528 200 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 OR4D1Q15615 310 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 SPIN4Q56A73 249 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 FAM219BQ5XKK7 198 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 TCEAL6Q6IPX3 200 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 ALKAL2Q6UX46 152 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 C1orf122Q6ZSJ8 110 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 OVCH1Q7RTY7 1134 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 POMGNT2Q8NAT1 580 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 OR2T12Q8NG77 320 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 OR5M9Q8NGP3 310 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 SNX33Q8WV41 574 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 CNOT9Q92600 299 aaKnown RBP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 WBP2Q969T9 261 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 FCRL1Q96LA6 429 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 EDEM2Q9BV94 578 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 MRTO4Q9UKD2 239 aaKnown RBP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 EXO1Q9UQ84 846 aaKnown RBP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 TP53TG5Q9Y2B4 290 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 C2orf78A6NCI8 922 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 L7N2F9 121 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 RTCAO00442 366 aaKnown RBP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 CD160O95971 181 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 PRR35P0CG20 571 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 IRF1P10914 325 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 FPR1P21462 350 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 GGT2P36268 569 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 GANABQ14697 944 aaKnown RBP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 P2RY14Q15391 338 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 TPGS2Q68CL5 300 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 RPL13AP3Q6NVV1 102 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 FAHD1Q6P587 224 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 CNIH2Q6PI25 160 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 C16orf59Q7L2K0 433 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 DEFB128Q7Z7B8 93 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 GPR149Q86SP6 731 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 ANKRD46Q86W74 232 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 SPAG16Q8N0X2 631 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 ARMC10Q8N2F6 343 aa8.3□□□□□ -1.08
ATG4A-203ENST00000372232 PTGR2Q8N8N7 351 aaPredicted RBP8.3□□□□□ -1.08
ATG4A-203ENST00000372232 OR6X1Q8NH79 312 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms