RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 OR56A3Q8NH54 315 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 ATOH1Q92858 354 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 KLHL15Q96M94 604 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 POTEKPQ9BYX7 375 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 MFFQ9GZY8 342 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 LHPPQ9H008 270 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 A0A0J9YY10 115 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 SOX1O00570 391 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 CSTAP01040 98 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 IGFBP1P08833 259 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 KDELR2P33947 212 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 CRISP1P54107 249 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 ABRAXAS2Q15018 415 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 PRSS48Q7RTY5 328 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 POGLUT1Q8NBL1 392 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 MDGA1Q8NFP4 955 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR8J1Q8NGP2 316 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 MBD3L1Q8WWY6 194 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 HYLS1Q96M11 299 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 IL17CQ9P0M4 197 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 TEX13DA0A0J9YY54 714 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 A0A1B0GVT2 93 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 F11P03951 625 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 FOLR3P41439 243 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 ACTC1P68032 377 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 ACTA1P68133 377 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 SHC2P98077 582 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 IMPA2O14732 288 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 P04436 131 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 DLSTP36957 453 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 PGAP1Q75T13 922 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 ADIPOR2Q86V24 386 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 MCHR1Q99705 422 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 TP63Q9H3D4 680 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 HSD17B7P56937 341 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC14A2Q15849 920 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 TMEM225Q6GV28 225 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 DPCDQ9BVM2 203 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 SAMD10Q9BYL1 202 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 PCDHB14Q9Y5E9 798 aa12.6□□□□□ -0.39
RAPGEF1-201ENST00000372189 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 F8W036 122 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 RBBP9O75884 186 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 CSTBP04080 98 aaKnown RBP12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 IL1RNP18510 177 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 DCKP27707 260 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 BLOC1S1P78537 153 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 TLE1Q04724 770 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 PLEKHN1Q494U1 663 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 GPAT4Q86UL3 456 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 HS3ST5Q8IZT8 346 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 GPR150Q8NGU9 434 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 RBP7Q96R05 134 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 ORAI3Q9BRQ5 295 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZDHHC11Q9H8X9 412 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 MGAT4CQ9UBM8 478 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 CCL26Q9Y258 94 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 H3BMQ9 156 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 MRPS14O60783 128 aaKnown RBP12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 MLLT10P55197 1068 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 RAB35Q15286 201 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 C4orf17Q53FE4 359 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZMAT1Q5H9K5 638 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR8S1Q8NH09 359 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 TMEM174Q8WUU8 243 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 GATA6Q92908 595 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 KCNN1Q92952 543 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 CITED1Q99966 193 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 ANKUB1A6NFN9 424 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 TNFRSF10AO00220 468 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 ABLIM3O94929 683 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 RHCEP18577 417 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 NNATQ16517 81 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 TAZQ16635 292 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 RPL13AP3Q6NVV1 102 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 RTN4RL1Q86UN2 441 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 TSPYL5Q86VY4 417 aaPredicted RBP12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 ABHD11Q8NFV4 315 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR2T33Q8NG76 320 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 CASTOR1Q8WTX7 329 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 SERINC2Q96SA4 455 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 TXN2Q99757 166 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 PIMREGQ9BSJ6 248 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 PBDC1Q9BVG4 233 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 OBP2AQ9NY56 170 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 ACOT7O00154 380 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 GLT8D1Q68CQ7 371 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 NADSYN1Q6IA69 706 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 DCDC5Q6ZRR9 648 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 CEACAM19Q7Z692 300 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 FAM109AQ8N4B1 249 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 LPAR4Q99677 370 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 LIN7CQ9NUP9 197 aaKnown RBP12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 LIPT1Q9Y234 373 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 MYH14Q7Z406 1995 aaKnown RBP12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR52A4PA6NMU1 304 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZNF254O75437 659 aa12.59□□□□□ -0.39
RAPGEF1-201ENST00000372189 HOXA9P31269 272 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms