RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 CCNYL3P0C7X3 344 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 NPIPA8P0DM63 369 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 CDK4P11802 303 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 TGM1P22735 817 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 CHN2P52757 468 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 DGCR6Q14129 220 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 ZSWIM7Q19AV6 140 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 FGD3Q5JSP0 725 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 DCST1Q5T197 706 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 MRPL2Q5T653 305 aaKnown RBP24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 PIP4P1Q86T03 277 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 ZSCAN1Q8NBB4 408 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 TAAR9Q96RI9 348 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 FEVQ99581 238 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 AKIRIN1Q9H9L7 192 aaPredicted RBP24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 FAM118AQ9NWS6 357 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 B3GALT1Q9Y5Z6 326 aa24.32■■□□□ 1.48
ATPAF1-202ENST00000371937 CDHR4A6H8M9 788 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 CLDN24A6NM45 220 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 CSO75390 466 aaKnown RBP24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 MT-CO3P00414 261 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 UBTFL6P0CB48 400 aaPredicted RBP24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 EBPQ15125 230 aaKnown RBP24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 TRIP6Q15654 476 aaKnown RBP24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 ZNF517Q6ZMY9 492 aaPredicted RBP24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 DEPDC7Q96QD5 511 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 MBOAT4Q96T53 435 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 NXF5Q9H1B4 397 aaKnown RBP24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 TOR4AQ9NXH8 423 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 SAGE2PA6NJ88 616 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 FRS3O43559 492 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 OXSR1O95747 527 aaPredicted RBP24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 GNAO1P09471 354 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 JMJD7P0C870 316 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 NBL1P41271 181 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 GPR143P51810 404 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 ATP12AP54707 1039 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 TAS2R41P59536 307 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 KCNAB2Q13303 367 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 EIF3IQ13347 325 aaKnown RBP24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 ZNF141Q15928 474 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 TMEM205Q6UW68 189 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 GLRX5Q86SX6 157 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 C9orf40Q8IXQ3 194 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 OFCC1Q8IZS5 231 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 SLC5A8Q8N695 610 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 B3GNT7Q8NFL0 401 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 OIT3Q8WWZ8 545 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 GAL3ST4Q96RP7 486 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 DDA1Q9BW61 102 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 ZNF556Q9HAH1 456 aa24.31■■□□□ 1.48
ATPAF1-202ENST00000371937 FAAHO00519 579 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 LYNP07948 512 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 ELAVL4P26378 380 aaKnown RBP24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 ETV5P41161 510 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 IL1RL1Q01638 556 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 PDZK1Q5T2W1 519 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 STPG1Q5TH74 334 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 FAM199XQ6PEV8 388 aaPredicted RBP24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 USP51Q70EK9 711 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 CPEB2Q7Z5Q1 589 aaKnown RBP24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 GALNT5Q7Z7M9 940 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 RANBP3LQ86VV4 465 aaPredicted RBP24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 LPAR4Q99677 370 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 WWTR1Q9GZV5 400 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 HOXD1Q9GZZ0 328 aa24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 PPIEQ9UNP9 301 aaKnown RBP24.3■■□□□ 1.48
ATPAF1-202ENST00000371937 IGHV3-20A0A0C4DH32 117 aa24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 TRBV4-1A0A0J9YWV2 114 aa24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 NPIPB9F8W1W9 429 aa24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 PSPHP78330 225 aa24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 LINC00471Q8N535 108 aa24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 GALNT6Q8NCL4 622 aa24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 C17orf47Q8NEP4 570 aa24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 MCHR1Q99705 422 aa24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 SEMA4CQ9C0C4 833 aa24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 POLR2J2Q9GZM3 115 aaKnown RBP24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 POLR2J3Q9H1A7 115 aaKnown RBP24.29■■□□□ 1.48
ATPAF1-202ENST00000371937 SLC16A6O15403 523 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 MITFO75030 526 aaPredicted RBP24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 IL33O95760 270 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 CD63P08962 238 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 ITGAMP11215 1152 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 FAM198BQ6UWH4 519 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 GRAMD2AQ8IUY3 354 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 ZNF614Q8N883 585 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 PNPLA3Q9NST1 481 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 FAM86C1Q9NVL1 165 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 PISDQ9UG56 409 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 POFUT2Q9Y2G5 429 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 KIF26BQ2KJY2 2108 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 CCDC187A0A096LP49 1063 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 TO15178 435 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 TPST2O60704 377 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 UGT2B11O75310 529 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 STK17BO94768 372 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 FUT4P22083 530 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 ST3GAL3Q11203 375 aa24.28■■□□□ 1.48
ATPAF1-202ENST00000371937 FOXD4Q12950 439 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms