RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 NLGN2Q8NFZ4 835 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 OR2T11Q8NH01 316 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 FNDC9Q8TBE3 224 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 ELP5Q8TE02 316 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 SMPDL3BQ92485 455 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 NIPSNAP3BQ9BS92 247 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 MED18Q9BUE0 208 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 ALG8Q9BVK2 526 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 STRA6Q9BX79 667 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 MINDY3Q9H8M7 445 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 PLEKHA3Q9HB20 300 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 PIGVQ9NUD9 493 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 CACNG4Q9UBN1 327 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 CSNK1G3Q9Y6M4 447 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 BTBD17A6NE02 478 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 TMEM235A6NFC5 223 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 IMPA2O14732 288 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 TCAPO15273 167 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 VNN1O95497 513 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 LGALS2P05162 132 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 JMJD7P0C870 316 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 RNH1P13489 461 aaKnown RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 HTR6P50406 440 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 DAOAP59103 153 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 FXYD4P59646 89 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 HNRNPKP61978 463 aaKnown RBP eCLIP8.12□□□□□ -1.11
LCA5-201ENST00000369846 RPL23AP62750 156 aaKnown RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 CDK3Q00526 305 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 IL10RBQ08334 325 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 SOWAHCQ53LP3 525 aaPredicted RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 FAM209AQ5JX71 171 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 CATSPEREQ5SY80 951 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 BEND7Q8N7W2 519 aaPredicted RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 TMEM145Q8NBT3 493 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 C2CD4AQ8NCU7 369 aaPredicted RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 SPRYD4Q8WW59 207 aaPredicted RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 ZNF516Q92618 1163 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 FAM46BQ96A09 425 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 DCLRE1CQ96SD1 692 aaKnown RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 SLC38A3Q99624 504 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 C1QTNF7Q9BXJ2 289 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 SPATC1LQ9H0A9 340 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 SDR39U1Q9NRG7 319 aaPredicted RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 ZFP57Q9NU63 452 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 GRHPRQ9UBQ7 328 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 NDRG3Q9UGV2 375 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 EXO1Q9UQ84 846 aaKnown RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 ZNF142P52746 1687 aaPredicted RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 COL5A2P05997 1499 aaPredicted RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 A8MXE2 369 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 GAPDHSO14556 408 aaPredicted RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 RAD1O60671 282 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 KLF8O95600 359 aaPredicted RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 ASGR1P07306 291 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 CSF1P09603 554 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 ZNF44P15621 663 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 LIPAP38571 399 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 GDNFP39905 211 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 STC1P52823 247 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 CCL23P55773 120 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 HMGN3Q15651 99 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 TP53I3Q53FA7 332 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 HORMAD2Q8N7B1 307 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 DPF1Q92782 380 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 YIPF5Q969M3 257 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 SDSLQ96GA7 329 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 RNF170Q96K19 258 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 PRRG4Q9BZD6 226 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 SLC19A3Q9BZV2 496 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 KANSL3Q9P2N6 904 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 TESQ9UGI8 421 aaKnown RBP8.12□□□□□ -1.11
LCA5-201ENST00000369846 PCDHGA2Q9Y5H1 932 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 ENPP4Q9Y6X5 453 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 EP400Q96L91 3159 aa8.12□□□□□ -1.11
LCA5-201ENST00000369846 G3V2L1 256 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 J3QR89 54 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 GPR25O00155 361 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 ITGB2P05107 769 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 MGST1P10620 155 aaKnown RBP8.11□□□□□ -1.11
LCA5-201ENST00000369846 LMO2P25791 158 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 CLCNKBP51801 687 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 CSNK2A1P68400 391 aaPredicted RBP8.11□□□□□ -1.11
LCA5-201ENST00000369846 MRPS34P82930 218 aaKnown RBP8.11□□□□□ -1.11
LCA5-201ENST00000369846 ZXDBP98169 803 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 SIX1Q15475 284 aaPredicted RBP8.11□□□□□ -1.11
LCA5-201ENST00000369846 VARS2Q5ST30 1063 aaKnown RBP8.11□□□□□ -1.11
LCA5-201ENST00000369846 SLX4IPQ5VYV7 408 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 RPL13AP3Q6NVV1 102 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 KCTD18Q6PI47 426 aaPredicted RBP8.11□□□□□ -1.11
LCA5-201ENST00000369846 CSNK2A3Q8NEV1 391 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 SYNPRQ8TBG9 265 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 GPR78Q96P69 363 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 WRAP53Q9BUR4 548 aaKnown RBP8.11□□□□□ -1.11
LCA5-201ENST00000369846 POLDIP3Q9BY77 421 aaKnown RBP8.11□□□□□ -1.11
LCA5-201ENST00000369846 FAM212BQ9NTI7 297 aaPredicted RBP8.11□□□□□ -1.11
LCA5-201ENST00000369846 FZD7O75084 574 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 CNR1P21554 472 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 GRM5P41594 1212 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 AKR1C3P42330 323 aa8.11□□□□□ -1.11
LCA5-201ENST00000369846 ZNF763Q0D2J5 394 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms