RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 METTL17Q9H7H0 456 aaPredicted RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 ZNF304Q9HCX3 659 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 POM121CA8CG34 1229 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 SMLR1H3BR10 107 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 HCRTR2O43614 444 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 BMP1P13497 986 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 GIPRP48546 466 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 PRMT2P55345 433 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 GNMTQ14749 295 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 PCNPQ8WW12 178 aaKnown RBP15.02■□□□□ -0
COL17A1-202ENST00000369733 HMGB4Q8WW32 186 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 TRIB2Q92519 343 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 NIPAL2Q9H841 368 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 PRODH2Q9UF12 536 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 MAFFQ9ULX9 164 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 PHYHO14832 338 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 CA12O43570 354 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 CSO75390 466 aaKnown RBP15.02■□□□□ -0
COL17A1-202ENST00000369733 IL32P24001 234 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 MMP12P39900 470 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 SIM1P81133 766 aaPredicted RBP15.02■□□□□ -0
COL17A1-202ENST00000369733 KIAA1211LQ6NV74 962 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 UBE2FQ969M7 185 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 MVB12BQ9H7P6 319 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 PRTFDC1Q9NRG1 225 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 ELOVL2Q9NXB9 296 aa15.02■□□□□ -0
COL17A1-202ENST00000369733 HYKKA2RU49 373 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 SMAD6O43541 496 aaKnown RBP15.02□□□□□ -0.01
COL17A1-202ENST00000369733 SLC43A1O75387 559 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 C6P13671 934 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 TMEM150AQ86TG1 271 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 C12orf40Q86WS4 652 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 OR8J2Q8NGG1 315 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 FIBINQ8TAL6 211 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 ELP4Q96EB1 424 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 SLC25A44Q96H78 314 aaPredicted RBP15.02□□□□□ -0.01
COL17A1-202ENST00000369733 FBXO8Q9NRD0 319 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 EVA1BQ9NVM1 165 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 GLTPQ9NZD2 209 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 CORINQ9Y5Q5 1042 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 PRAMEF2O60811 474 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 AOAHP28039 575 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 AHRP35869 848 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 MC3RP41968 323 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 RPS15AP62244 130 aaKnown RBP15.02□□□□□ -0.01
COL17A1-202ENST00000369733 NKPD1Q17RQ9 610 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 PGBD5Q8N414 524 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF283Q8N7M2 679 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 OR2T4Q8NH00 348 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 DCUN1D4Q92564 292 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 PARPBPQ9NWS1 579 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 KLRF1Q9NZS2 232 aa15.02□□□□□ -0.01
COL17A1-202ENST00000369733 RAB3DO95716 219 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 ARAFP10398 606 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 NR2C1P13056 603 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 DLX5P56178 289 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 CREB3L2Q70SY1 520 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 GRASPQ7Z6J2 395 aaPredicted RBP15.01□□□□□ -0.01
COL17A1-202ENST00000369733 HORMAD2Q8N7B1 307 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 TMEM239Q8WW34 195 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 ASB11Q8WXH4 323 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 URM1Q9BTM9 101 aaKnown RBP15.01□□□□□ -0.01
COL17A1-202ENST00000369733 MRI1Q9BV20 369 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 NDUFB2O95178 105 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 AKAIN1P0CW23 69 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 HOXC5Q00444 222 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 PGGHGQ32M88 737 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 KATNBL1Q9H079 304 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 CCDC86Q9H6F5 360 aaKnown RBP15.01□□□□□ -0.01
COL17A1-202ENST00000369733 EGLN3Q9H6Z9 239 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 GALNT9Q9HCQ5 603 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 QPCTLQ9NXS2 382 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 KLHL42Q9P2K6 505 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 DOT1LQ8TEK3 1739 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 FAM183AA6NL82 134 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 FAM171A2A8MVW0 826 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 HSPA12AO43301 675 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 CNMDO75829 334 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 TYRP1P17643 537 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 SGSHP51688 502 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 CNKSR3Q6P9H4 555 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 TMEM207Q6UWW9 146 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 DLEU7Q6UYE1 221 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 SLC9B2Q86UD5 537 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
COL17A1-202ENST00000369733 OR9A2Q8NGT5 310 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 ADAMTS14Q8WXS8 1223 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 RCE1Q9Y256 329 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 HMGN2P05204 90 aaKnown RBP15.01□□□□□ -0.01
COL17A1-202ENST00000369733 SLC10A3P09131 477 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 SLC35A2P78381 396 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 GGTA1PQ4G0N0 100 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 CHRDL2Q6WN34 429 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 MEPCEQ7L2J0 689 aaKnown RBP15.01□□□□□ -0.01
COL17A1-202ENST00000369733 NLGN4XQ8N0W4 816 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 OR5AR1Q8NGP9 310 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 MS4A4EQ96PG1 132 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 NIPSNAP1Q9BPW8 284 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 PBDC1Q9BVG4 233 aa15.01□□□□□ -0.01
COL17A1-202ENST00000369733 C1QTNF2Q9BXJ5 285 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms