RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 KIR2DS3K7RE56 304 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 PRKNO60260 465 aaPredicted RBP9.96□□□□□ -0.81
TPM3-212ENST00000368533 RDH16O75452 317 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 CCNB2O95067 398 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 M6PRP20645 277 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 RFX3P48380 749 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 NXPH1P58417 271 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 SHC2P98077 582 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 PDE7AQ13946 482 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 LASP1Q14847 261 aaKnown RBP9.96□□□□□ -0.81
TPM3-212ENST00000368533 KIR2DS5Q14953 304 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 GPAT3Q53EU6 434 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 ARMCX4Q5H9R4 360 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 KCTD20Q7Z5Y7 419 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 DNAJC22Q8N4W6 341 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 CSNK1A1LQ8N752 337 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 TMEM52Q8NDY8 209 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 C7orf57Q8NEG2 295 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 OR4M2Q8NGB6 313 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 CLDN23Q96B33 292 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 SPATA9Q9BWV2 254 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 C11orf16Q9NQ32 467 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 CTPS2Q9NRF8 586 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 LRIT1Q9P2V4 623 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 SLC6A14Q9UN76 642 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 ASB4Q9Y574 426 aa9.96□□□□□ -0.81
TPM3-212ENST00000368533 IGHV5-51A0A0C4DH38 117 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 CPED1A4D0V7 1026 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 RHPN2P1A8MT19 583 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 SOX14O95416 240 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 PROS1P07225 676 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 CPN2P22792 545 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 MC3RP41968 323 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 AFF3P51826 1226 aaKnown RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 MVDP53602 400 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 CDC42P60953 191 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 RPS15AP62244 130 aaKnown RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 CSNK2BP67870 215 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 HOXC5Q00444 222 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 BAK1Q16611 211 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 IQCCQ4KMZ1 466 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 DEF8Q6ZN54 512 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 TSEN54Q7Z6J9 526 aaKnown RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 GKN2Q86XP6 184 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 SLC25A45Q8N413 288 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 YIPF7Q8N8F6 280 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 C1orf216Q8TAB5 229 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 GEMIN6Q8WXD5 167 aaKnown RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 SLC7A6Q92536 515 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 RERGLQ9H628 205 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 PSORS1C1Q9UIG5 152 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 A0A0J9YY10 115 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 NUPL2O15504 423 aaKnown RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 TPST2O60704 377 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 TNFRSF21O75509 655 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 MTRF1O75570 445 aaKnown RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 IFNW1P05000 195 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 OR12D1P0DN82 309 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 PTNP21246 168 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 CCT3P49368 545 aaKnown RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 DSTNP60981 165 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 STXBP1P61764 594 aaKnown RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 CTAG1AP78358 180 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 TAGLNQ01995 201 aaKnown RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 ESCO2Q56NI9 601 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 C6orf120Q7Z4R8 191 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 PRSS58Q8IYP2 241 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 BAHD1Q8TBE0 780 aaPredicted RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 AHCYL2Q96HN2 611 aaKnown RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 CEP19Q96LK0 163 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 PITX2Q99697 317 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 PIP5K1AQ99755 562 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 AIFM2Q9BRQ8 373 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 SLC35C2Q9NQQ7 365 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 GPR27Q9NS67 375 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 SLC23A1Q9UHI7 598 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 ATXN7L1Q9ULK2 861 aaPredicted RBP9.96□□□□□ -0.82
TPM3-212ENST00000368533 TMCC3Q9ULS5 477 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 RNF215Q9Y6U7 377 aa9.96□□□□□ -0.82
TPM3-212ENST00000368533 PIAS2O75928 621 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 PTHP01270 115 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 AHRP35869 848 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 HNRNPKP61978 463 aaKnown RBP eCLIP9.95□□□□□ -0.82
TPM3-212ENST00000368533 CCDC157Q569K6 752 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 C6orf132Q5T0Z8 1188 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 LINC00299Q6ZSB3 139 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 CAMKK1Q8N5S9 505 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 TTLQ8NG68 377 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 FCGR1BQ92637 280 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 METTL2AQ96IZ6 378 aaKnown RBP9.95□□□□□ -0.82
TPM3-212ENST00000368533 QRFPRQ96P65 431 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 CHST8Q9H2A9 424 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 C1GALT1Q9NS00 363 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 KCNE3Q9Y6H6 103 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 A0A0B4J293 547 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 PRAMEF25A6NGN4 478 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 C10orf142B7Z368 130 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 OR10H3O60404 316 aa9.95□□□□□ -0.82
TPM3-212ENST00000368533 RPLP0P05388 317 aaKnown RBP9.95□□□□□ -0.82
TPM3-212ENST00000368533 CDK1P06493 297 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms