RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SLC34A3Q8N130 599 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 C1orf216Q8TAB5 229 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 CTHRC1Q96CG8 243 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 TCTN2Q96GX1 697 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 LRR1Q96L50 414 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 ZNF578Q96N58 590 aaPredicted RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 TAPBPLQ9BX59 468 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 NXF2Q9GZY0 626 aaKnown RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 TCEAL2Q9H3H9 227 aaPredicted RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 DSN1Q9H410 356 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 ZBTB20Q9HC78 741 aaPredicted RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 ADAP2Q9NPF8 381 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 SEMA4GQ9NTN9 838 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 MAT2BQ9NZL9 334 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 TESQ9UGI8 421 aaKnown RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 SLC6A14Q9UN76 642 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 PNMA8CA0A1B0GUJ8 204 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 METTL15A6NJ78 407 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 TTC36A6NLP5 189 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 PRKYO43930 277 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 HMGN1P05114 100 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 RNH1P13489 461 aaKnown RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 PSMA1P25786 263 aaKnown RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 IDUAP35475 653 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 BIKQ13323 160 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 INAQ16352 499 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 MINDY4Q4G0A6 757 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 TRMT12Q53H54 448 aaKnown RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 WDR45BQ5MNZ6 344 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 DCDC5Q6ZRR9 648 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 OLIG3Q7RTU3 272 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 GDF7Q7Z4P5 450 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 OR4N5Q8IXE1 308 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 CLIP4Q8N3C7 705 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 NANOGP1Q8N7R0 232 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 HOXB13Q92826 284 aaPredicted RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 SLC35B4Q969S0 331 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 HSPA12BQ96MM6 686 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 ZNF582Q96NG8 517 aaPredicted RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 LRRC61Q9BV99 259 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 KLHL25Q9H0H3 589 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 ANKRA2Q9H9E1 313 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 ISYNA1Q9NPH2 558 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 IL20Q9NYY1 176 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 TMEM5Q9Y2B1 443 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 LSM2Q9Y333 95 aaKnown RBP13.05□□□□□ -0.32
USF1-202ENST00000368020 CHST2Q9Y4C5 530 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 PEX16Q9Y5Y5 336 aa13.05□□□□□ -0.32
USF1-202ENST00000368020 PI4KAP42356 2102 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 LOC100506127A0A0U1RQW1 187 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 ZNF860A6NHJ4 632 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 PRR33A8MZF0 331 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 J3QRK9 145 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 OR10H2O60403 315 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 LDB3O75112 727 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 ZIC2O95409 532 aaPredicted RBP13.04□□□□□ -0.32
USF1-202ENST00000368020 CSF2P04141 144 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 OCM2P0CE71 109 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 OCMP0CE72 109 aaPredicted RBP13.04□□□□□ -0.32
USF1-202ENST00000368020 NME1P15531 152 aaKnown RBP13.04□□□□□ -0.32
USF1-202ENST00000368020 MAP3K8P41279 467 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 PPP5CP53041 499 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 COPZ1P61923 177 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 ZNF45Q02386 682 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 MAP4K2Q12851 820 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 ITGADQ13349 1161 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 FAM53BQ14153 422 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 TSTQ16762 297 aaKnown RBP13.04□□□□□ -0.32
USF1-202ENST00000368020 ANKDD1AQ495B1 522 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.04□□□□□ -0.32
USF1-202ENST00000368020 GARNL3Q5VVW2 1013 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 DGLUCYQ7Z3D6 616 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 ZNF595Q8IYB9 648 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 VWA5B2Q8N398 1253 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 MFSD4AQ8N468 514 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 ZBTB44Q8NCP5 570 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 GPR151Q8TDV0 419 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 ZG16BQ96DA0 208 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 ZC3H10Q96K80 434 aaKnown RBP13.04□□□□□ -0.32
USF1-202ENST00000368020 CHRNA10Q9GZZ6 450 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 FGF20Q9NP95 211 aaPredicted RBP13.04□□□□□ -0.32
USF1-202ENST00000368020 GPR55Q9Y2T6 319 aaPredicted RBP13.04□□□□□ -0.32
USF1-202ENST00000368020 MRPS2Q9Y399 296 aaKnown RBP13.04□□□□□ -0.32
USF1-202ENST00000368020 EXOSC1Q9Y3B2 195 aaKnown RBP13.04□□□□□ -0.32
USF1-202ENST00000368020 CORINQ9Y5Q5 1042 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 CDH10Q9Y6N8 788 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 PMF1-BGLAPU3KQ54 211 aa13.04□□□□□ -0.32
USF1-202ENST00000368020 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 TMEM129A0AVI4 362 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 ISPDA4D126 451 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 KDM4EB2RXH2 506 aaPredicted RBP13.03□□□□□ -0.32
USF1-202ENST00000368020 B4DGG1 531 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 DLL1O00548 723 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 CLDN4O14493 209 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 ARHGAP33O14559 1287 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 KLF4O43474 513 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 BRINP1O60477 761 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 NKX2-2O95096 273 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 IGFBP1P08833 259 aaPredicted RBP13.03□□□□□ -0.32
USF1-202ENST00000368020 TRHRP34981 398 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms