RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 TTPALQ9BTX7 342 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SOX21Q9Y651 276 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TEX264Q9Y6I9 313 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 LINC00862A6NCI5 91 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 VSTM5A8MXK1 200 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 KLRC4O43908 158 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 C5AR1P21730 350 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ARL13AQ5H913 290 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 USP50Q70EL3 339 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GPAT4Q86UL3 456 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MASTLQ96GX5 879 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 LRTM1Q9HBL6 345 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MBPP02686 304 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PGA3P0DJD8 388 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ST6GAL1P15907 406 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 HMGCLP35914 325 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MANFP55145 182 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 WNT4P56705 351 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 HIST1H3AP68431 136 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR7A5Q15622 319 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR56A3Q8NH54 315 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PTP4A1Q93096 173 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 KLHL15Q96M94 604 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CACNG6Q9BXT2 260 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MYEF2Q9P2K5 600 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ENTPD2Q9Y5L3 495 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CDC42BPAQ5VT25 1732 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM63AO94886 807 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 THBS1P07996 1170 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SYPP08247 313 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CNR1P21554 472 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TNFSF10P50591 281 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM198Q66K66 360 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TTLL10Q6ZVT0 673 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 KCNE4Q8WWG9 221 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NKIRAS2Q9NYR9 191 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR51F1A6NGY5 319 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PSMB1P20618 241 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SERF2P84101 59 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SPHARQ15513 63 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PIWIL1Q96J94 861 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR2M4Q96R27 311 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TPP1O14773 563 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 F11P03951 625 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PRKACAP17612 351 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 BTDP43251 543 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FAM69BQ5VUD6 431 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ALG3Q92685 438 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 KLRG1Q96E93 195 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM248Q9NWD8 314 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 IGLON5A6NGN9 336 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 WASH3PC4AMC7 463 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CYB561D2O14569 222 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FBXO24O75426 580 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 AQP2P41181 271 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CSNK1DP48730 415 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FNTBP49356 437 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CASP7P55210 303 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FUT2Q10981 343 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR2G6Q5TZ20 316 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NXPE4Q6UWF7 544 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ARHGEF39Q8N4T4 335 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 C10orf53Q8N6V4 93 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 DCLRE1CQ96SD1 692 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ABCG5Q9H222 651 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NUDT3O95989 172 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PRF1P14222 555 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 INSRRP14616 1297 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CPOXP36551 454 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PTPRCAPQ14761 206 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PLEKHS1Q5SXH7 462 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF343Q6P1L6 599 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TMPPEQ6ZT21 453 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ILDR1Q86SU0 546 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR2L2Q8NH16 312 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FOXN4Q96NZ1 517 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FAM193BQ96PV7 902 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 AK9Q5TCS8 1911 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 RPP40O75818 363 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ACTR1BP42025 376 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PLA2G16P53816 162 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ST8SIA6P61647 398 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SPP2Q13103 211 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 C16orf59Q7L2K0 433 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR4K2Q8NGD2 314 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR9A4Q8NGU2 314 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR2T35Q8NGX2 323 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 LRRC46Q96FV0 321 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CNTNAP3BQ96NU0 1288 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TAAR1Q96RJ0 339 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SEMA4GQ9NTN9 838 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TBC1D3KA0A087X1G2 549 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TBC1D3BA6NDS4 549 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TBC1D3FA6NER0 549 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FOXE1O00358 373 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 EI24O14681 340 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CDK14O94921 469 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ITGA3P26006 1051 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CDONQ4KMG0 1287 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TXNDC8Q6A555 127 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms