RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 SLAMF1Q13291 335 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 LASP1Q14847 261 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 DCST2Q5T1A1 773 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 METAP1DQ6UB28 335 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 KIAA1324Q6UXG2 1013 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF550Q7Z398 422 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF248Q8NDW4 579 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PHOSPHO2Q8TCD6 241 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 SGCDQ92629 289 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 RBPMSQ93062 196 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRRC1Q96M27 445 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 MCHR1Q99705 422 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PELOQ9BRX2 385 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 NIT2Q9NQR4 276 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 SAGE1Q9NXZ1 904 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 TIMM8BQ9Y5J9 83 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 TRPM6Q9BX84 2022 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 TMEM221A6NGB7 291 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR5K4A6NMS3 321 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 F5H5P2 479 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 GBAP04062 536 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 SBK2P0C263 348 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 HLA-FP30511 346 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 BMPR1AP36894 532 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 C21orf58P58505 322 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 TDGQ13569 410 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 HNRNPA1L2Q32P51 320 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PLEKHN1Q494U1 663 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.06□□□□□ -1.62e-7■■□□□ 13
CDC42BPA-204ENST00000366767 LINC00615Q96LM1 132 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 NEDD4LQ96PU5 975 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR14A2Q96R54 314 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAM83CQ9BQN1 747 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 TIMM29Q9BSF4 260 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC25A37Q9NYZ2 338 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR10H1Q9Y4A9 318 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR51B4Q9Y5P0 310 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ASPDHA6ND91 283 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 SCGB1D1O95968 90 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 MT-ND5P03915 603 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 LCKP06239 509 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACRP10323 421 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 VLDLRP98155 873 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF155Q12901 538 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 GPM6BQ13491 265 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 DUSP6Q16828 381 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 MLIPQ5VWP3 458 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAHD1Q6P587 224 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 GRAMD2AQ8IUY3 354 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 RASGEF1AQ8N9B8 481 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ADAMTS18Q8TE60 1221 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 SECISBP2Q96T21 854 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 NELL2Q99435 816 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 VPS25Q9BRG1 176 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ABCG4Q9H172 646 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ANKRD19PQ9H560 264 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ERVMER34-1Q9H9K5 563 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 RANGRFQ9HD47 186 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 MSRAQ9UJ68 235 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC22A31A6NKX4 558 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 H7BY64 318 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 POLR2CP19387 275 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ATP5A1P25705 553 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 MAP3K8P41279 467 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 CTSOP43234 321 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 WNT4P56705 351 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF616Q08AN1 781 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PEA15Q15121 130 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRPF38BQ5VTL8 546 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRAMEF8Q5VWM4 474 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRAMEF7Q5VXH5 474 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAM71E1Q6IPT2 247 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 C3orf33Q6P1S2 294 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 OR2L8Q8NGY9 312 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZNF296Q8WUU4 475 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 KIAA1143Q96AT1 154 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PRAP1Q96NZ9 151 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 SMIM14Q96QK8 99 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PITX2Q99697 317 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 C17orf62Q9BQA9 187 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ZBP1Q9H171 429 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ABCG5Q9H222 651 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 MED17Q9NVC6 651 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 SLC35F4A4IF30 521 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 METTL15A6NJ78 407 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 GTPBP1O00178 669 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 XKRYO14609 159 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 WDPCPO95876 746 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 FCER2P06734 321 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 KIAA0040Q15053 153 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 MRPL41Q8IXM3 137 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 FAM217AQ8IXS0 508 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 LAS2Q8IYD9 372 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ENTHD1Q8IYW4 607 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 TMEM145Q8NBT3 493 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 ACTRT3Q9BYD9 372 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 DNAJC27Q9NZQ0 273 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 PPT2Q9UMR5 302 aa5.06□□□□□ -1.6
CDC42BPA-204ENST00000366767 B4GAT1O43505 415 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms