RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 K7EM74 188 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 UBFD1O14562 309 aaKnown RBP7.23□□□□□ -1.25
YBX3-204ENST00000366290 DYNC1I1O14576 645 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 TM9SF1O15321 606 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 P2RX6O15547 441 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 TBX6O95947 436 aaPredicted RBP7.23□□□□□ -1.25
YBX3-204ENST00000366290 BPGMP07738 259 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 CYC1P08574 325 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 C1GALT1C1LP0DN25 315 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 MYL2P10916 166 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 TSPAN8P19075 237 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 TAC1P20366 129 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 IMPDH1P20839 514 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 CASP2P42575 452 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 OR1D4P47884 311 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 CCR8P51685 355 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 SLC18A1P54219 525 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 KLRB1Q12918 225 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 CHIT1Q13231 466 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 DOC2AQ14183 400 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 HKDC1Q2TB90 917 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 DCAF10Q5QP82 559 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 MLIPQ5VWP3 458 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 ATG9BQ674R7 924 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 ADNP2Q6IQ32 1131 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 IGFL3Q6UXB1 125 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 LURAP1LQ8IV03 231 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 SLC22A9Q8IVM8 553 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 SNX31Q8N9S9 440 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 FAM47BQ8NA70 645 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 PCYOX1LQ8NBM8 494 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 RERGQ96A58 199 aaPredicted RBP7.23□□□□□ -1.25
YBX3-204ENST00000366290 PKNOX2Q96KN3 472 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 FER1L6-AS2Q96M78 137 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 AICDAQ9GZX7 198 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 STMN4Q9H169 189 aaPredicted RBP7.23□□□□□ -1.25
YBX3-204ENST00000366290 EHD1Q9H4M9 534 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 NOL11Q9H8H0 719 aaKnown RBP7.23□□□□□ -1.25
YBX3-204ENST00000366290 PELI2Q9HAT8 420 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 ZNF304Q9HCX3 659 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 P4HTMQ9NXG6 502 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 CTSFQ9UBX1 484 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 ZNF282Q9UDV7 671 aaPredicted RBP7.23□□□□□ -1.25
YBX3-204ENST00000366290 CDC14AQ9UNH5 594 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 TP53TG5Q9Y2B4 290 aa7.23□□□□□ -1.25
YBX3-204ENST00000366290 TRBC2A0A5B9 178 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 SLC22A23A1A5C7 686 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 FAM90A7PA6NKC0 464 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 FAM90A22PA8MWA6 464 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 FAM90A12PA8MX19 464 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 FAM90A23PA8MXZ1 464 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 HMGB1P1B2RPK0 211 aaPredicted RBP7.22□□□□□ -1.25
YBX3-204ENST00000366290 H0YIG0 161 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 H3BQF6 201 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 SOCS6O14544 535 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 ATP8B1O43520 1251 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 KLHL41O60662 606 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 SUPT7LO94864 414 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 ZWINTO95229 277 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 NSA2O95478 260 aaKnown RBP7.22□□□□□ -1.25
YBX3-204ENST00000366290 EIF2S1P05198 315 aaKnown RBP7.22□□□□□ -1.25
YBX3-204ENST00000366290 GNAZP19086 355 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 AHRP35869 848 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 NAGLUP54802 743 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 SH2D4BQ5SQS7 431 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 ZCCHC23Q6ZST2 131 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 ASB18Q6ZVZ8 466 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 ADGRG3Q86Y34 549 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.22□□□□□ -1.25
YBX3-204ENST00000366290 L3MBTL4Q8NA19 623 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 CCDC63Q8NA47 563 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 MFSD9Q8NBP5 474 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 CLEC1AQ8NC01 280 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 FDCSPQ8NFU4 85 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 TRPC4APQ8TEL6 797 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 CREB3L4Q8TEY5 395 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.22□□□□□ -1.25
YBX3-204ENST00000366290 CCDC126Q96EE4 140 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 ZNF382Q96SR6 550 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 SLC25A23Q9BV35 468 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 NTMT1Q9BV86 223 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 DRC3Q9H069 523 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 PAIP1Q9H074 479 aaKnown RBP7.22□□□□□ -1.25
YBX3-204ENST00000366290 IQCGQ9H095 443 aaKnown RBP7.22□□□□□ -1.25
YBX3-204ENST00000366290 MKKSQ9NPJ1 570 aaPredicted RBP7.22□□□□□ -1.25
YBX3-204ENST00000366290 SEMA4BQ9NPR2 832 aaPredicted RBP7.22□□□□□ -1.25
YBX3-204ENST00000366290 ZNF71Q9NQZ8 489 aaPredicted RBP7.22□□□□□ -1.25
YBX3-204ENST00000366290 C14orf105Q9NVL8 296 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 C5AR2Q9P296 337 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 ZNF490Q9ULM2 529 aaPredicted RBP7.22□□□□□ -1.25
YBX3-204ENST00000366290 RNF11Q9Y3C5 154 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 HS3ST3B1Q9Y662 390 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 SLC22A7Q9Y694 548 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 ESPL1Q14674 2120 aa7.22□□□□□ -1.25
YBX3-204ENST00000366290 LOC102723996A0A087X1L8 192 aa7.21□□□□□ -1.26
YBX3-204ENST00000366290 WDR91A4D1P6 747 aa7.21□□□□□ -1.26
YBX3-204ENST00000366290 C4orf51C9J302 202 aa7.21□□□□□ -1.26
YBX3-204ENST00000366290 CLGNO14967 610 aa7.21□□□□□ -1.26
YBX3-204ENST00000366290 BIRC5O15392 142 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms