RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 SOX3P41225 446 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 SSR4P51571 173 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 HNRNPFP52597 415 aaKnown RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 AP1S2P56377 157 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 PPIAP62937 165 aaKnown RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 CCZ1BP86790 482 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 CCZ1P86791 482 aaPredicted RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 TFF3Q07654 80 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 MYBPHQ13203 477 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 SNTB1Q13884 538 aaKnown RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 RUNX2Q13950 521 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 PPP1R7Q15435 360 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 C18orf21Q32NC0 220 aaPredicted RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 XKR6Q5GH73 641 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 SPANXN3Q5MJ09 141 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 RNASEH2BQ5TBB1 312 aaKnown RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 TMEM211Q6ICI0 200 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 NIPAL1Q6NVV3 410 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 ARHGAP11AQ6P4F7 1023 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 SBSNQ6UWP8 590 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 IL20RBQ6UXL0 311 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 FAM47BQ8NA70 645 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 TRPV3Q8NET8 790 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 OR2M7Q8NG81 312 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 OR5M9Q8NGP3 310 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 OR10Q1Q8NGQ4 319 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 LILRB4Q8NHJ6 448 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 GABPB2Q8TAK5 448 aaPredicted RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 CREB3L4Q8TEY5 395 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 ATL1Q8WXF7 558 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 CERS2Q96G23 380 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 CFAP36Q96G28 342 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 VMP1Q96GC9 406 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 SMIM10Q96HG1 83 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 EGFL8Q99944 293 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 CCDC77Q9BR77 488 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 ZNF559Q9BR84 538 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 GATA5Q9BWX5 397 aaPredicted RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 PELI2Q9HAT8 420 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 KCNJ16Q9NPI9 418 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 PRTFDC1Q9NRG1 225 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 PNPLA3Q9NST1 481 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 HPF1Q9NWY4 346 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 SLC22A14Q9Y267 594 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 YARS2Q9Y2Z4 477 aaKnown RBP4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 MMACHCQ9Y4U1 282 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 LIPGQ9Y5X9 500 aa4.76□□□□□ -1.65
RNU4-4P-201ENST00000364588 ARHGAP21Q5T5U3 1957 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 NCF1BA6NI72 391 aaPredicted RBP4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 NCF1CA8MVU1 366 aaPredicted RBP4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 FOXO6A8MYZ6 492 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 PGRMC1O00264 195 aaKnown RBP4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 ZFAND5O76080 213 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 ZWINTO95229 277 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 TTC4O95801 387 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 IFNA16P05015 189 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 HOXD4P09016 255 aaPredicted RBP4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 NCF1P14598 390 aaPredicted RBP4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 CD1EP15812 388 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 ELK3P41970 407 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 MAGEA5P43359 124 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 SOX2P48431 317 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 DNASE1L1P49184 302 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 ZNF84P51523 738 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 GPR143P51810 404 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 PLA2G16P53816 162 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 IST1P53990 364 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 ALDH18A1P54886 795 aaKnown RBP4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 RAB38P57729 211 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 STXBP1P61764 594 aaKnown RBP4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 GAB1Q13480 694 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 PPP1R3AQ16821 1122 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 ANXA2RQ3ZCQ2 193 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 GXYLT1Q4G148 440 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 FBXO48Q5FWF7 155 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 CES4AQ5XG92 561 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 ADNP2Q6IQ32 1131 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 FAM45BPQ6NSW5 357 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 WDR93Q6P2C0 686 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 LRIG3Q6UXM1 1119 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 TMIGD1Q6UXZ0 262 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 CNTN4Q8IWV2 1026 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 KLHDC8AQ8IYD2 350 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 MMP21Q8N119 569 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 RASGEF1CQ8N431 466 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 ZNF321PQ8N8H1 164 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 SRFBP1Q8NEF9 429 aaKnown RBP4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 FAM45AQ8TCE6 357 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 WIPF2Q8TF74 440 aaPredicted RBP4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 WDR60Q8WVS4 1066 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 IGFBPL1Q8WX77 278 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 MS4A6EQ96DS6 147 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 RASL10BQ96S79 203 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 SMC6Q96SB8 1091 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 CSF3RQ99062 836 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 WACQ9BTA9 647 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 TTTY12Q9BZ98 90 aa4.75□□□□□ -1.65
RNU4-4P-201ENST00000364588 OR8D2Q9GZM6 311 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms