RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 C16orf90A8MZG2 172 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 FOXE1O00358 373 aaPredicted RBP0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 SCRG1O75711 98 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 CD55P08174 381 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 P0C880 135 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 PNMA6AP0CW24 399 aaPredicted RBP0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 PPIAL4GP0DN37 164 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 NPY1RP25929 384 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 ADORA2BP29275 332 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 STIP1P31948 543 aaKnown RBP0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 FRKP42685 505 aaPredicted RBP0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 RPL29P47914 159 aaKnown RBP0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 SH3BGRP55822 239 aaPredicted RBP0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 ENPEPQ07075 957 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 C17orf67Q0P5P2 114 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 COX19Q49B96 90 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 CMPK2Q5EBM0 449 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 PAGE3Q5JUK9 113 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 ACP7Q6ZNF0 438 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 LINC00336Q6ZUF6 198 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 KLHDC8AQ8IYD2 350 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 THEM5Q8N1Q8 247 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 KCTD6Q8NC69 237 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 PSMG2Q969U7 264 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 NOL4LQ96MY1 436 aaPredicted RBP0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 FERMT1Q9BQL6 677 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 ZNF350Q9GZX5 532 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 FANCFQ9NPI8 374 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 DIMT1Q9UNQ2 313 aaKnown RBP0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 PCM1Q15154 2024 aa0.48□□□□□ -2.33
RNU6-238P-201ENST00000363313 PTPRUQ92729 1446 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 SMIM28A0A1B0GU29 152 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 C11orf94C9JXX5 98 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 SLC30A4O14863 429 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 CTDSPLO15194 276 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 FAM189A1O60320 539 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 GSTA1P08263 222 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 FCARP24071 287 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 RPL4P36578 427 aaKnown RBP0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 TNFSF10P50591 281 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 RAG2P55895 527 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 KCNK10P57789 538 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 STX1AQ16623 288 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 TEX44Q53QW1 395 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 LRRC38Q5VT99 294 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 NCR3LG1Q68D85 454 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 PARGQ86W56 976 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 PYROXD2Q8N2H3 581 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 ZNF740Q8NDX6 193 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 TEX13AQ9BXU3 409 aaPredicted RBP0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 PFDN4Q9NQP4 134 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 ANKMY1Q9P2S6 941 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 TRPC4Q9UBN4 977 aa0.47□□□□□ -2.33
RNU6-238P-201ENST00000363313 IGLV3-12A0A075B6K2 115 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 IGKV2-24A0A0C4DH68 120 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 A0A0J9YVX5 310 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 C7orf66A4D0T2 115 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 LRIT2A6NDA9 550 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 ARPC1BO15143 372 aaKnown RBP0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 HCN1O60741 890 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 SLITRK3O94933 977 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 SLC16A8O95907 504 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 IGSF6O95976 241 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 RLN1P04808 185 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 ADRB2P07550 413 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 GCFC2P16383 781 aaKnown RBP0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 PTAFRP25105 342 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 CCND3P30281 292 aaPredicted RBP0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 DHPSP49366 369 aaPredicted RBP0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 STARP49675 285 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 PLOD1Q02809 727 aaPredicted RBP0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 ARFRP1Q13795 201 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 DNAJC21Q5F1R6 531 aaKnown RBP0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 KRBOX4Q5JUW0 171 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 HYIQ5T013 277 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 Q6ZR03 302 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 KRT74Q7RTS7 529 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 FAM220AQ7Z4H9 259 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 SELENOMQ8WWX9 145 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 TMEM158Q8WZ71 300 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 ST6GALNAC4Q9H4F1 302 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 EXOC7Q9UPT5 735 aa0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 COL5A3P25940 1745 aaPredicted RBP0.46□□□□□ -2.34
RNU6-238P-201ENST00000363313 IGSF9BQ9UPX0 1349 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 UBE2CO00762 179 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 IFIT3O14879 490 aaKnown RBP0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 CFLARO15519 480 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 RRP8O43159 456 aaKnown RBP0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 AHCYL1O43865 530 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 ATP9AO75110 1047 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 SERPINF2P08697 491 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 CCNA2P20248 432 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 COX7A1P24310 79 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 GCKP35557 465 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 ACADSBP45954 432 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 CAPZA1P52907 286 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 EXOSC7Q15024 291 aaKnown RBP0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 IRF4Q15306 451 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 CDC42EP5Q6NZY7 148 aa0.45□□□□□ -2.34
RNU6-238P-201ENST00000363313 C19orf35Q6ZS72 473 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms