RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 ZNF155Q12901 538 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-201ENST00000361909 ZNF234Q14588 700 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 C9orf64Q5T6V5 341 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 BAIAP2L2Q6UXY1 529 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 TMEM91Q6ZNR0 172 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 BTN2A1Q7KYR7 527 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 PIAS4Q8N2W9 510 aaPredicted RBP17.84■□□□□ 0.45
CMTM3-201ENST00000361909 NR4A3Q92570 626 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 PTP4A1Q93096 173 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 WBP1Q96G27 269 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 FNDC11Q9BVV2 318 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 NEUROD4Q9HD90 331 aa17.84■□□□□ 0.45
CMTM3-201ENST00000361909 EXOGQ9Y2C4 368 aaKnown RBP17.84■□□□□ 0.45
CMTM3-201ENST00000361909 A0A1W2PPC1 479 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 MFSD2BA6NFX1 497 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 LANCL1O43813 399 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 KAT7O95251 611 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 EPHX1P07099 455 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 ICAM2P13598 275 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 CELP19835 753 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 ELAVL3Q14576 367 aaKnown RBP17.83■□□□□ 0.45
CMTM3-201ENST00000361909 GSG1Q2KHT4 349 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 EOGTQ5NDL2 527 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 IDNKQ5T6J7 187 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 BHLHB9Q6PI77 547 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 TFAP2EQ6VUC0 442 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 SLCO4C1Q6ZQN7 724 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 ZER1Q7Z7L7 766 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 TPRA1Q86W33 373 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 OR56B4Q8NH76 319 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 OR8D1Q8WZ84 308 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 SUSD6Q92537 303 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 SLC9A6Q92581 669 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 MED8Q96G25 268 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 TEX12Q9BXU0 123 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 SERHL2Q9H4I8 314 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 LDAHQ9H6V9 325 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 CD93Q9NPY3 652 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 MED17Q9NVC6 651 aa17.83■□□□□ 0.45
CMTM3-201ENST00000361909 THAP10Q9P2Z0 257 aaPredicted RBP17.83■□□□□ 0.45
CMTM3-201ENST00000361909 EEF1E1O43324 174 aaKnown RBP17.83■□□□□ 0.44
CMTM3-201ENST00000361909 PRAF2O60831 178 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 MMP20O60882 483 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 H2AFB2P0C5Z0 115 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 F8A1P23610 371 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 SPINT3P49223 89 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 PITPNAQ00169 270 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 CNTN1Q12860 1018 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 FOXD4Q12950 439 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-201ENST00000361909 ZNF273Q14593 569 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 TRAM1Q15629 374 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 RPS26P11Q5JNZ5 115 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-201ENST00000361909 NHLRC3Q5JS37 347 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 SLC22A10Q63ZE4 541 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 FAM83HQ6ZRV2 1179 aaPredicted RBP17.83■□□□□ 0.44
CMTM3-201ENST00000361909 ZBTB44Q8NCP5 570 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 OR6C4Q8NGE1 309 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 OR5P2Q8WZ92 322 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 COQ10AQ96MF6 247 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 MTG2Q9H4K7 406 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 MIEF1Q9NQG6 463 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 DMRT3Q9NQL9 472 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 SDHAF2Q9NX18 166 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 SEC14L3Q9UDX4 400 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 POMT2Q9UKY4 750 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 SLC9A8Q9Y2E8 581 aa17.83■□□□□ 0.44
CMTM3-201ENST00000361909 A8MUA0 341 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 A8MX80 341 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 ANHXE9PGG2 379 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 TBX19O60806 448 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 OR12D1P0DN82 309 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 RNF144AP50876 292 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-201ENST00000361909 TPMTP51580 245 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 CDH11P55287 796 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 DBPQ10586 325 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-201ENST00000361909 GRIN2CQ14957 1233 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 TOMM5Q8N4H5 51 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 HORMAD2Q8N7B1 307 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 FBXO15Q8NCQ5 510 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-201ENST00000361909 PMEPA1Q969W9 287 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 SGTBQ96EQ0 304 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 SECISBP2Q96T21 854 aaKnown RBP17.82■□□□□ 0.44
CMTM3-201ENST00000361909 RPP25Q9BUL9 199 aaKnown RBP17.82■□□□□ 0.44
CMTM3-201ENST00000361909 ZNF436Q9C0F3 470 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-201ENST00000361909 TMEM168Q9H0V1 697 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 SLC6A15Q9H2J7 730 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 TTYH1Q9H313 450 aaPredicted RBP17.82■□□□□ 0.44
CMTM3-201ENST00000361909 KLF15Q9UIH9 416 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 KCNMB2Q9Y691 235 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 REV3LO60673 3130 aa17.82■□□□□ 0.44
CMTM3-201ENST00000361909 NPC1O15118 1278 aa17.81■□□□□ 0.44
CMTM3-201ENST00000361909 LRRTM2O43300 516 aa17.81■□□□□ 0.44
CMTM3-201ENST00000361909 SOX30O94993 753 aa17.81■□□□□ 0.44
CMTM3-201ENST00000361909 APODP05090 189 aa17.81■□□□□ 0.44
CMTM3-201ENST00000361909 XPAP23025 273 aaPredicted RBP17.81■□□□□ 0.44
CMTM3-201ENST00000361909 SOX18P35713 384 aa17.81■□□□□ 0.44
CMTM3-201ENST00000361909 TAS2R50P59544 299 aa17.81■□□□□ 0.44
CMTM3-201ENST00000361909 SLC36A2Q495M3 483 aa17.81■□□□□ 0.44
CMTM3-201ENST00000361909 ADNP2Q6IQ32 1131 aa17.81■□□□□ 0.44
CMTM3-201ENST00000361909 SERPINA13PQ6UXR4 307 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms