RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 TIMM22Q9Y584 194 aa18.92■□□□□ 0.62
CD47-202ENST00000361309 HS3ST1O14792 307 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 DLX3O60479 287 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 UTS2O95399 124 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 PSMG1O95456 288 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 ANGPTL1O95841 491 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 PLGP00747 810 aaPredicted RBP18.91■□□□□ 0.62
CD47-202ENST00000361309 TAC1P20366 129 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 GSTM5P46439 218 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 NR1H2P55055 460 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 CTBP2P56545 445 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 C17orf67Q0P5P2 114 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 TNK1Q13470 666 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.91■□□□□ 0.62
CD47-202ENST00000361309 TMEM44Q2T9K0 475 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 APOOLQ6UXV4 268 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 WFDC8Q8IUA0 241 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 GMPPAQ96IJ6 420 aaPredicted RBP18.91■□□□□ 0.62
CD47-202ENST00000361309 TBL1XR1Q9BZK7 514 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 GLIPR2Q9H4G4 154 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 DDX18Q9NVP1 670 aaKnown RBP18.91■□□□□ 0.62
CD47-202ENST00000361309 TMEM216Q9P0N5 145 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 ZNF180Q9UJW8 692 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 MRTO4Q9UKD2 239 aaKnown RBP18.91■□□□□ 0.62
CD47-202ENST00000361309 VDAC3Q9Y277 283 aa18.91■□□□□ 0.62
CD47-202ENST00000361309 IGLV3-32A0A0A0MS00 114 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 CRLF1O75462 422 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 SLITRK5O94991 958 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 PSMD4P55036 377 aaKnown RBP18.9■□□□□ 0.62
CD47-202ENST00000361309 KRTAP1-1Q07627 177 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 ZNF763Q0D2J5 394 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 ZNHIT3Q15649 155 aaPredicted RBP18.9■□□□□ 0.62
CD47-202ENST00000361309 OR2L13Q8N349 312 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 ZNF611Q8N823 705 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 OR10D3Q8NH80 312 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 KCNA7Q96RP8 456 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 SIRT5Q9NXA8 310 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 STOML1Q9UBI4 398 aa18.9■□□□□ 0.62
CD47-202ENST00000361309 GXYLT2A0PJZ3 443 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 TMCC2O75069 709 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 SS18L1O75177 396 aaPredicted RBP18.89■□□□□ 0.61
CD47-202ENST00000361309 OPN1LWP04000 364 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 SNRPAP09012 282 aaKnown RBP18.89■□□□□ 0.61
CD47-202ENST00000361309 IL11P20809 199 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 IMPDH1P20839 514 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 PRR5P85299 388 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 CTU2Q2VPK5 515 aaKnown RBP18.89■□□□□ 0.61
CD47-202ENST00000361309 GRAMD1BQ3KR37 738 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 SPDYAQ5MJ70 313 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 SYT10Q6XYQ8 523 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 ELP4Q96EB1 424 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 TMEM204Q9BSN7 226 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 LMF2Q9BU23 707 aaKnown RBP18.89■□□□□ 0.61
CD47-202ENST00000361309 ACTR6Q9GZN1 396 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 MIEF1Q9NQG6 463 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 GRID1Q9ULK0 1009 aa18.89■□□□□ 0.61
CD47-202ENST00000361309 CADP27708 2225 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 SOX30O94993 753 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 IGKV1D-16P01601 117 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 ENO1P06733 434 aaKnown RBP18.88■□□□□ 0.61
CD47-202ENST00000361309 NTSP30990 170 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 GABRA3P34903 492 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 PKNOX1P55347 436 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 FAM71E1Q6IPT2 247 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 BEND4Q6ZU67 534 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 MAPK1IP1LQ8NDC0 245 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 SLC9A6Q92581 669 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 AKAP1Q92667 903 aaKnown RBP eCLIP18.88■□□□□ 0.61
CD47-202ENST00000361309 ADGRG7Q96K78 797 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 AMDHD1Q96NU7 426 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 NPAS1Q99742 590 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 FANCFQ9NPI8 374 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 TAS2R7Q9NYW3 318 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 MCTS1Q9ULC4 181 aaKnown RBP18.88■□□□□ 0.61
CD47-202ENST00000361309 LAMP3Q9UQV4 416 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 STK38LQ9Y2H1 464 aa18.88■□□□□ 0.61
CD47-202ENST00000361309 SERTM1A2A2V5 107 aa18.87■□□□□ 0.61
CD47-202ENST00000361309 CCDC151A5D8V7 595 aa18.87■□□□□ 0.61
CD47-202ENST00000361309 CXCL13O43927 109 aa18.87■□□□□ 0.61
CD47-202ENST00000361309 ZNF17P17021 662 aa18.87■□□□□ 0.61
CD47-202ENST00000361309 ATP5F1P24539 256 aaPredicted RBP18.87■□□□□ 0.61
CD47-202ENST00000361309 ETF1P62495 437 aaKnown RBP18.87■□□□□ 0.61
CD47-202ENST00000361309 LCP2Q13094 533 aa18.87■□□□□ 0.61
CD47-202ENST00000361309 ALKBH2Q6NS38 261 aa18.87■□□□□ 0.61
CD47-202ENST00000361309 WDR75Q8IWA0 830 aaKnown RBP18.87■□□□□ 0.61
CD47-202ENST00000361309 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.87■□□□□ 0.61
CD47-202ENST00000361309 PIK3R3Q92569 461 aa18.87■□□□□ 0.61
CD47-202ENST00000361309 C3orf14Q9HBI5 128 aa18.87■□□□□ 0.61
CD47-202ENST00000361309 MYNNQ9NPC7 610 aa18.87■□□□□ 0.61
CD47-202ENST00000361309 PAQR5Q9NXK6 330 aaPredicted RBP18.87■□□□□ 0.61
CD47-202ENST00000361309 RNF223E7ERA6 249 aa18.86■□□□□ 0.61
CD47-202ENST00000361309 TNFSF11O14788 317 aa18.86■□□□□ 0.61
CD47-202ENST00000361309 KCNH1O95259 989 aa18.86■□□□□ 0.61
CD47-202ENST00000361309 SYNGR4O95473 234 aa18.86■□□□□ 0.61
CD47-202ENST00000361309 PRKAA2P54646 552 aa18.86■□□□□ 0.61
CD47-202ENST00000361309 FOXA1P55317 472 aa18.86■□□□□ 0.61
CD47-202ENST00000361309 RPS4XP62701 263 aaKnown RBP18.86■□□□□ 0.61
CD47-202ENST00000361309 VEZF1Q14119 521 aa18.86■□□□□ 0.61
CD47-202ENST00000361309 CLEC12BQ2HXU8 276 aa18.86■□□□□ 0.61
CD47-202ENST00000361309 EXOC3L1Q86VI1 746 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms