RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 NPIPB15A6NHN6 443 aaPredicted RBP13.17□□□□□ -0.3
SMC5-201ENST00000361138 TACR1P25103 407 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 SEMA3BQ13214 749 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 TIGD3Q6B0B8 471 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 FAM83HQ6ZRV2 1179 aaPredicted RBP13.17□□□□□ -0.3
SMC5-201ENST00000361138 HMGB4Q8WW32 186 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 NEIL2Q969S2 332 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 KCTD12Q96CX2 325 aaKnown RBP13.17□□□□□ -0.3
SMC5-201ENST00000361138 NECAB3Q96P71 396 aaPredicted RBP13.17□□□□□ -0.3
SMC5-201ENST00000361138 SMIM14Q96QK8 99 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 SMG9Q9H0W8 520 aaKnown RBP13.17□□□□□ -0.3
SMC5-201ENST00000361138 EGLN3Q9H6Z9 239 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 MN1Q10571 1320 aaPredicted RBP13.17□□□□□ -0.3
SMC5-201ENST00000361138 TCTE1Q5JU00 501 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 APOOLQ6UXV4 268 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 ZNF461Q8TAF7 563 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 DCUN1D4Q92564 292 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 C11orf84Q9BUA3 381 aaPredicted RBP13.17□□□□□ -0.3
SMC5-201ENST00000361138 SLC25A18Q9H1K4 315 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 ASIC5Q9NY37 505 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 SNAPINO95295 136 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 ASGR2P07307 311 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 PTBP1P26599 531 aaKnown RBP eCLIP13.17□□□□□ -0.32e-7■■□□□ 14.3
SMC5-201ENST00000361138 PXDC1Q5TGL8 231 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 DGLUCYQ7Z3D6 616 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 BTLAQ7Z6A9 289 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 OR5T2Q8NGG2 359 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 BRI3BPQ8WY22 251 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 CLEC2DQ9UHP7 191 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 TMPRSS11EQ9UL52 423 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 TMEM14AQ9Y6G1 99 aa13.17□□□□□ -0.3
SMC5-201ENST00000361138 hCG_1807616A0A1W2PRN6 198 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 TLX3O43711 291 aaPredicted RBP13.16□□□□□ -0.3
SMC5-201ENST00000361138 ARAFP10398 606 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 CHAF1BQ13112 559 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 SERPINA12Q8IW75 414 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 OR5T3Q8NGG3 340 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 SORBS1Q9BX66 1292 aaKnown RBP13.16□□□□□ -0.3
SMC5-201ENST00000361138 GABARAPL3Q9BY60 117 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 SLC6A16Q9GZN6 736 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 PRDM9Q9NQV7 894 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 RCE1Q9Y256 329 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 GMDSO60547 372 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 DNAJB6O75190 326 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 ITGA5P08648 1049 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 CCR7P32248 378 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 AQP2P41181 271 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 SLC19A1P41440 591 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 HTR3AP46098 478 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 GATMP50440 423 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 DLX5P56178 289 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 MLIPQ5VWP3 458 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 ANKRD34AQ69YU3 496 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 RFPL4BQ6ZWI9 263 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 GPR135Q8IZ08 494 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 HORMAD2Q8N7B1 307 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 GPR26Q8NDV2 337 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 ADAMTS14Q8WXS8 1223 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 DPH7Q9BTV6 452 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 DUSP21Q9H596 190 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 NHSL1Q5SYE7 1610 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 IFNA17P01571 189 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 AOAHP28039 575 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 PRSS3P35030 304 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 MTNR1BP49286 362 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 ILKQ13418 452 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 PGGHGQ32M88 737 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 CHRFAM7AQ494W8 412 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 TMEM150AQ86TG1 271 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 KLHL42Q9P2K6 505 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 POLHQ9Y253 713 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 PHYHO14832 338 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 TAPBPO15533 448 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 ZNF623O75123 536 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 TCRBP04435 133 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 PRKCAP17252 672 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 NFYAP23511 347 aaPredicted RBP13.16□□□□□ -0.3
SMC5-201ENST00000361138 PBX2P40425 430 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 MBTPS1Q14703 1052 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 LEG1Q6P5S2 330 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 USP51Q70EK9 711 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 SVBPQ8N300 66 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 OR1J4Q8NGS1 313 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 FAM46BQ96A09 425 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 SLC39A13Q96H72 371 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 GPR62Q9BZJ7 368 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 CNMDO75829 334 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 ERVK-21P61565 698 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 BTG1P62324 171 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 MGAT3Q09327 533 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 KIAA0319Q5VV43 1072 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 TCEAL6Q6IPX3 200 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 KCTD18Q6PI47 426 aaPredicted RBP13.16□□□□□ -0.3
SMC5-201ENST00000361138 ENPP7Q6UWV6 458 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 G6PC3Q9BUM1 346 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 PBDC1Q9BVG4 233 aa13.16□□□□□ -0.3
SMC5-201ENST00000361138 SRA1Q9HD15 236 aaKnown RBP13.16□□□□□ -0.3
SMC5-201ENST00000361138 KHNYNO15037 678 aaKnown RBP13.15□□□□□ -0.3
SMC5-201ENST00000361138 LCMT2O60294 686 aaKnown RBP13.15□□□□□ -0.3
SMC5-201ENST00000361138 PIPP12273 146 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms