RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 TRIM40Q6P9F5 258 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 FAM199XQ6PEV8 388 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 VITQ6UXI7 678 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 LINC00114Q6XXX2 140 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PTCHD4Q6ZW05 846 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF765Q7L2R6 523 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ADGRD2Q7Z7M1 963 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 LAPTM4BQ86VI4 370 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 CIR1Q86X95 450 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 LILRB2Q8N423 598 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TBC1D19Q8N5T2 526 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 BMPERQ8N8U9 685 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 BEND2Q8NDZ0 799 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SDR9C7Q8NEX9 313 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 OR6X1Q8NH79 312 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 OR5R1Q8NH85 324 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ABHD4Q8TB40 342 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 RAET1EQ8TD07 263 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 RHBDD1Q8TEB9 315 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GTF3AQ92664 365 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 DIO2Q92813 273 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TCEAL4Q96EI5 215 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GPR21Q99679 349 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ZSCAN5AQ9BUG6 496 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 NKX6-2Q9C056 277 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PDGFDQ9GZP0 370 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 REEP4Q9H6H4 257 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 IPPKQ9H8X2 491 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 LMAN1LQ9HAT1 526 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PELI2Q9HAT8 420 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 MCCC2Q9HCC0 563 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 C14orf119Q9NWQ9 140 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 NTNG1Q9Y2I2 539 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 HSPB11Q9Y547 144 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SNX10Q9Y5X0 201 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 EML5Q05BV3 1969 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 A0A087WUJ7 227 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 POM121BA6NF01 834 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 YY2O15391 372 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GRAP2O75791 330 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 EPPINO95925 133 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 CFDP00746 253 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 THBS1P07996 1170 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF865P0CJ78 1059 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 RNH1P13489 461 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 FOLR1P15328 257 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TBPP20226 339 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ITGALP20701 1170 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 S1PR1P21453 382 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 NT5EP21589 574 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 POU1F1P28069 291 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TRHRP34981 398 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 ACTR1BP42025 376 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 LIM2P55344 173 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PFN3P60673 137 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 CACNB2Q08289 660 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 IL15RAQ13261 267 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PTPRNQ16849 979 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 CDO1Q16878 200 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 COA6Q5JTJ3 125 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PXDC1Q5TGL8 231 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 FRG2Q64ET8 278 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 AWAT2Q6E213 333 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 JMJD6Q6NYC1 403 aaPredicted RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 IL27RAQ6UWB1 636 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 C17orf99Q6UX52 265 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PLEKHM3Q6ZWE6 761 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GAREM2Q75VX8 874 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SSX9Q7RTT3 188 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SYT14Q8NB59 555 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 C19orf18Q8NEA5 215 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 OR5L2Q8NGL0 311 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 SNIP1Q8TAD8 396 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PHF21BQ96EK2 531 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PCED1BQ96HM7 432 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 FRG2BQ96QU4 278 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 CHCHD6Q9BRQ6 235 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TM6SF2Q9BZW4 377 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 NRSN2Q9GZP1 204 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 QRSL1Q9H0R6 528 aaKnown RBP4.22□□□□□ -1.73
PTPN22-201ENST00000359785 RNF167Q9H6Y7 350 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 WDR26Q9H7D7 661 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 BRD7Q9NPI1 651 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 MMP26Q9NRE1 261 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 C14orf105Q9NVL8 296 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 TREM2Q9NZC2 230 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GALPQ9UBC7 116 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PFDN2Q9UHV9 154 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 FBXL21Q9UKT6 434 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 PLCL2Q9UPR0 1127 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 RAI2Q9Y5P3 530 aa4.22□□□□□ -1.73
PTPN22-201ENST00000359785 GSAPA4D1B5 854 aa4.21□□□□□ -1.74
PTPN22-201ENST00000359785 H7BY64 318 aa4.21□□□□□ -1.74
PTPN22-201ENST00000359785 PHOX2AO14813 284 aa4.21□□□□□ -1.74
PTPN22-201ENST00000359785 LDLRAD4O15165 306 aa4.21□□□□□ -1.74
PTPN22-201ENST00000359785 GASTP01350 101 aa4.21□□□□□ -1.74
PTPN22-201ENST00000359785 TIMP2P16035 220 aa4.21□□□□□ -1.74
PTPN22-201ENST00000359785 ABOP16442 354 aa4.21□□□□□ -1.74
PTPN22-201ENST00000359785 EPB42P16452 691 aa4.21□□□□□ -1.74
PTPN22-201ENST00000359785 NFYAP23511 347 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms