RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MARK1Q9P0L2 795 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 HCN3Q9P1Z3 774 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 NFKBIL1Q9UBC1 381 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 RPS6KB2Q9UBS0 482 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PRKAG2Q9UGJ0 569 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 GNG8Q9UK08 70 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 A0A0B4J293 547 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 A0A1W2PS29 197 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 IGLON5A6NGN9 336 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 AGAP14A8MT82 685 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 GTPBP1O00178 669 aaKnown RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 LCMT2O60294 686 aaKnown RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 FGF18O76093 207 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 RASGRP1O95267 797 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 MT-ND5P03915 603 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 LIMS3P0CW19 117 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 LIMS4P0CW20 117 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 LAG3P18627 525 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 VIPR2P41587 438 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 HMGA2P52926 109 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 HCCSP53701 268 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 CRYZQ08257 329 aaKnown RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.16□□□□□ -1.422e-9■■□□□ 11.8
CSDE1-203ENST00000358528 TCEAL5Q5H9L2 206 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SLC38A6Q8IZM9 456 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ZNF655Q8N720 491 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ANKRD53Q8N9V6 530 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PLA2G15Q8NCC3 412 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 OR5W2Q8NH69 310 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 RPLP0P6Q8NHW5 317 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 C1orf216Q8TAB5 229 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 RIT1Q92963 219 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ZMYND19Q96E35 227 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 RNF31Q96EP0 1072 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 DTD2Q96FN9 168 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PAWRQ96IZ0 340 aaKnown RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SLC25A18Q9H1K4 315 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 HINT3Q9NQE9 182 aaKnown RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 KLHL21Q9UJP4 597 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 STOML2Q9UJZ1 356 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 TMEM5Q9Y2B1 443 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PCDHGB7Q9Y5F8 929 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SCN10AQ9Y5Y9 1956 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 TRAV27A0A087WT01 109 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 FXYD6-FXYD2A0A087WZ82 144 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SLC9B1P1A6NJY1 282 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 KIAA0355O15063 1070 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 EIF4EP06730 217 aaKnown RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PROS1P07225 676 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ASGR2P07307 311 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 POU3F3P20264 500 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 EDNRAP25101 427 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 LCN1P31025 176 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PSMB10P40306 273 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 MAZP56270 477 aaKnown RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 CLDN12P56749 244 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 POU6F2P78424 691 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SNTA1Q13424 505 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ELOAQ14241 798 aaKnown RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 NNATQ16517 81 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PGGHGQ32M88 737 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 GLYR1Q49A26 553 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 SIGIRRQ6IA17 410 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 PSRC1Q6PGN9 363 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 POMZP3Q6PJE2 187 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 RANBP3LQ86VV4 465 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 TMEFF1Q8IYR6 380 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 CPXM2Q8N436 756 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 LINC00471Q8N535 108 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 TMEM99Q8N816 258 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 COX18Q8N8Q8 333 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 OR8D4Q8NGM9 314 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 DNAJA4Q8WW22 397 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ZNF514Q96K75 400 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-203ENST00000358528 C4orf36Q96KX1 117 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 AMDHD1Q96NU7 426 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 OR7D2Q96RA2 312 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ATF6BQ99941 703 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 MS4A8Q9BY19 250 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 FXYD6Q9H0Q3 95 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 A4GALTQ9NPC4 353 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ATP13A2Q9NQ11 1180 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ATG4BQ9Y4P1 393 aa6.16□□□□□ -1.42
CSDE1-203ENST00000358528 ANTXRLA6NF34 631 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 L7N2F9 121 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 RNF13O43567 381 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 LANCL1O43813 399 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 RHOP08100 348 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 RAB3BP20337 219 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 F8A1P23610 371 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 HLA-DMAP28067 261 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 CCR2P41597 374 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 TEKQ02763 1124 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 TSPAN31Q12999 210 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 NDUFAF6Q330K2 333 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 DEFB134Q4QY38 66 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 MPP7Q5T2T1 576 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 CAMKMTQ7Z624 323 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 SLC44A3Q8N4M1 653 aa6.15□□□□□ -1.42
CSDE1-203ENST00000358528 GALNT11Q8NCW6 608 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms