RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 C6orf15Q6UXA7 325 aaPredicted RBP15.76■□□□□ 0.11
TPM1-205ENST00000357980 C17orf47Q8NEP4 570 aa15.76■□□□□ 0.11
TPM1-205ENST00000357980 OR2Y1Q8NGV0 311 aa15.76■□□□□ 0.11
TPM1-205ENST00000357980 WDR36Q8NI36 951 aaKnown RBP15.76■□□□□ 0.11
TPM1-205ENST00000357980 PHF10Q8WUB8 498 aaKnown RBP15.76■□□□□ 0.11
TPM1-205ENST00000357980 SMPD3Q9NY59 655 aaPredicted RBP15.76■□□□□ 0.11
TPM1-205ENST00000357980 FOXJ2Q9P0K8 574 aa15.76■□□□□ 0.11
TPM1-205ENST00000357980 C19orf25Q9UFG5 118 aaPredicted RBP15.76■□□□□ 0.11
TPM1-205ENST00000357980 SLC13A4Q9UKG4 626 aa15.76■□□□□ 0.11
TPM1-205ENST00000357980 PADI1Q9ULC6 663 aa15.76■□□□□ 0.11
TPM1-205ENST00000357980 LOC102723996A0A087X1L8 192 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 CDHR4A6H8M9 788 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 TNFRSF11BO00300 401 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 FRS3O43559 492 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 TPST2O60704 377 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 ARHGDIAP52565 204 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 ZNF141Q15928 474 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 C3orf38Q5JPI3 329 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 MRPL2Q5T653 305 aaKnown RBP15.75■□□□□ 0.11
TPM1-205ENST00000357980 SLC29A4Q7RTT9 530 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 CYP4Z1Q86W10 505 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 C8orf44Q96CB5 159 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 GAL3ST4Q96RP7 486 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 LPAR4Q99677 370 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 NMNAT1Q9HAN9 279 aaPredicted RBP15.75■□□□□ 0.11
TPM1-205ENST00000357980 KLHL28Q9NXS3 571 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 PDP1Q9P0J1 537 aaPredicted RBP15.75■□□□□ 0.11
TPM1-205ENST00000357980 RHCGQ9UBD6 479 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 TMEFF2Q9UIK5 374 aaPredicted RBP15.75■□□□□ 0.11
TPM1-205ENST00000357980 PTRH2Q9Y3E5 179 aaKnown RBP15.75■□□□□ 0.11
TPM1-205ENST00000357980 GVINP1Q7Z2Y8 2422 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 TO15178 435 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 DENRO43583 198 aaKnown RBP15.75■□□□□ 0.11
TPM1-205ENST00000357980 SEC24DO94855 1032 aaPredicted RBP15.75■□□□□ 0.11
TPM1-205ENST00000357980 SNAP29O95721 258 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 IL33O95760 270 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 GK3PQ14409 553 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 DECR1Q16698 335 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 COLEC12Q5KU26 742 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 PDZK1Q5T2W1 519 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 OR52J3Q8NH60 311 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 NRSN2Q9GZP1 204 aa15.75■□□□□ 0.11
TPM1-205ENST00000357980 EXPH5Q8NEV8 1989 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 TM4SF5O14894 197 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 BCAS1O75363 584 aaPredicted RBP15.74■□□□□ 0.11
TPM1-205ENST00000357980 GADD45GO95257 159 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 CSRP1P21291 193 aaKnown RBP15.74■□□□□ 0.11
TPM1-205ENST00000357980 ZNF136P52737 540 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 ATP12AP54707 1039 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 RNF4P78317 190 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 PIN1Q13526 163 aaPredicted RBP15.74■□□□□ 0.11
TPM1-205ENST00000357980 EXOC3L2Q2M3D2 409 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 FAHD1Q6P587 224 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 ASCL5Q7RTU5 278 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 CACTIN-AS1Q8N1I8 211 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 TFAP2CQ92754 450 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 VMP1Q96GC9 406 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 PRRC1Q96M27 445 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 RDH12Q96NR8 316 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 PHOX2BQ99453 314 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 FUZQ9BT04 418 aa15.74■□□□□ 0.11
TPM1-205ENST00000357980 THRBP10828 461 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 DAPP51397 102 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 PSMD4P55036 377 aaKnown RBP15.73■□□□□ 0.11
TPM1-205ENST00000357980 RGS8P57771 180 aaPredicted RBP15.73■□□□□ 0.11
TPM1-205ENST00000357980 SLC26A5P58743 744 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 PCOLCEQ15113 449 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 MICAQ29983 383 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 TMEM164Q5U3C3 297 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 HLA-DQA1Q5Y7H0 255 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 KDM4DQ6B0I6 523 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 PIK3C3Q8NEB9 887 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 OR4C3Q8NH37 302 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 EFHD2Q96C19 240 aaPredicted RBP15.73■□□□□ 0.11
TPM1-205ENST00000357980 PSD2Q9BQI7 771 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 ADI1Q9BV57 179 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 Q9H521 79 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 TRBV4-1A0A0J9YWV2 114 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 A0A1W2PRQ8 180 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 PCDH17O14917 1159 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 HS6ST1O60243 411 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 H1F0P07305 194 aaKnown RBP15.73■□□□□ 0.11
TPM1-205ENST00000357980 CD63P08962 238 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 RAB40ALP0C0E4 278 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 CCNYL3P0C7X3 344 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 NR0B1P51843 470 aaKnown RBP15.73■□□□□ 0.11
TPM1-205ENST00000357980 MERTKQ12866 999 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 TARDBPQ13148 414 aaKnown RBP eCLIP15.73■□□□□ 0.11
TPM1-205ENST00000357980 DGCR6Q14129 220 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 FGFBP1Q14512 234 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 HSDL2Q6YN16 418 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 GRAMD2AQ8IUY3 354 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 CHERPQ8IWX8 916 aaKnown RBP15.73■□□□□ 0.11
TPM1-205ENST00000357980 NUBPLQ8TB37 319 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 GIPC3Q8TF64 312 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 CT55Q8WUE5 264 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 OIT3Q8WWZ8 545 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 DIO2Q92813 273 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 HSPBAP1Q96EW2 488 aa15.73■□□□□ 0.11
TPM1-205ENST00000357980 PRR14Q9BWN1 585 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms