RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MSLNLQ96KJ4 702 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR51I1Q9H343 314 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 BEX1Q9HBH7 125 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 MYNNQ9NPC7 610 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PTGFRNQ9P2B2 879 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 EXTL2Q9UBQ6 330 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 TAC3Q9UHF0 121 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 KCND3Q9UK17 655 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC13A4Q9UKG4 626 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAM183AA6NL82 134 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 CPSF4LA6NMK7 179 aaKnown RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 H7BY64 318 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 K7ESM1 405 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 LEFTY2O00292 366 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PLPP1O14494 284 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 HRGP04196 525 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 S100A9P06702 114 aaKnown RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 C8orf89P0DMQ9 161 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PSMB5P28074 263 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 CDH11P55287 796 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 TAS2R41P59536 307 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 LASP1Q14847 261 aaKnown RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SGCAQ16586 387 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 HES5Q5TA89 166 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SMARCD3Q6STE5 483 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 KLBQ86Z14 1044 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR6S1Q8NH40 331 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 POF1BQ8WVV4 589 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 CREB3L1Q96BA8 519 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAM46AQ96IP4 442 aaKnown RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PRAP1Q96NZ9 151 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 TRMT61BQ9BVS5 477 aaKnown RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SAP130Q9H0E3 1048 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC28A3Q9HAS3 691 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 FZD3Q9NPG1 666 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 TEX10Q9NXF1 929 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 RNF186Q9NXI6 227 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 HS3ST2Q9Y278 367 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC9A8Q9Y2E8 581 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 AP1M2Q9Y6Q5 423 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC5A10A0PJK1 596 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PDCD5O14737 125 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 B4GALT2O60909 372 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 ABLIM3O94929 683 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 RB1P06400 928 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SRPRAP08240 638 aaKnown RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 DNASE1P24855 282 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 NNMTP40261 264 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 KCNJ5P48544 419 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 RNF144AP50876 292 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PPP3R1P63098 170 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PDE7AQ13946 482 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 FGL2Q14314 439 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PABPC1L2AQ5JQF8 200 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PRAMEF14Q5SWL7 426 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 HENMT1Q5T8I9 393 aaKnown RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PRAMEF13Q5VWM6 474 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC27A4Q6P1M0 643 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 MTFR2Q6P444 385 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 KANSL1Q7Z3B3 1105 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 KIAA0907Q7Z7F0 614 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR5AR1Q8NGP9 310 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR9A1PQ8NGU1 263 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 SMPDL3AQ92484 453 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 KAT2AQ92830 837 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 TCEAL3Q969E4 200 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 FCRL4Q96PJ5 515 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 CDCP1Q9H5V8 836 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 NDRG3Q9UGV2 375 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PHF11Q9UIL8 331 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 A4GNTQ9UNA3 340 aa7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 PPIEQ9UNP9 301 aaKnown RBP7.73□□□□□ -1.17
CDC42SE1-201ENST00000357235 VCANP13611 3396 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SHISA3A0PJX4 238 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAM74A7A6NL05 159 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAM170BA6NMN3 283 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 HOXA2O43364 376 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 KLHL18O94889 574 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 DHFRP00374 187 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SYPP08247 313 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAM157BP0CG42 384 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 GPR4P46093 362 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC6A11P48066 632 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 METAP1P53582 386 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SMIM11AP58511 58 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 FGL1Q08830 312 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 NOGQ13253 232 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 GPNMBQ14956 572 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF750Q32MQ0 723 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAM74A3Q4VXF1 159 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF628Q5EBL2 1059 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 PYHIN1Q6K0P9 492 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 TMEM107Q6UX40 140 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC9B2Q86UD5 537 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ADGRF3Q8IZF5 1079 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 FAM26EQ8N5C1 309 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 TRAM1L1Q8N609 369 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF565Q8N9K5 539 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR51G2Q8NGK0 314 aa7.72□□□□□ -1.17
CDC42SE1-201ENST00000357235 OR2T4Q8NH00 348 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms