RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ADARB1P78563 741 aaKnown RBP6.11□□□□□ -1.43
UPF2-201ENST00000356352 GPR50Q13585 617 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 DUSP7Q16829 419 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 UBE2UQ5VVX9 321 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 SLC39A5Q6ZMH5 540 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 COMMD6Q7Z4G1 85 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 TPRA1Q86W33 373 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 GLIS1Q8NBF1 620 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 FAM83FQ8NEG4 500 aaPredicted RBP6.11□□□□□ -1.43
UPF2-201ENST00000356352 OR5D14Q8NGL3 314 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 OR5W2Q8NH69 310 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ASB17Q8WXJ9 295 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ISG20Q96AZ6 181 aaKnown RBP6.11□□□□□ -1.43
UPF2-201ENST00000356352 C16orf70Q9BSU1 422 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 HSD3B7Q9H2F3 369 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 C14orf119Q9NWQ9 140 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 RNF186Q9NXI6 227 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ACTR10Q9NZ32 417 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 GDE1Q9NZC3 331 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 GLTPQ9NZD2 209 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 KLHL42Q9P2K6 505 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 SLC7A7Q9UM01 511 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 B3GALT1Q9Y5Z6 326 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 SLC22A7Q9Y694 548 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 EGFP01133 1207 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 SIM1P81133 766 aaPredicted RBP6.11□□□□□ -1.43
UPF2-201ENST00000356352 GPR176Q14439 515 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 OR4D1Q15615 310 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 PCGF3Q3KNV8 242 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 CRTC1Q6UUV9 634 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ACBD4Q8NC06 268 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 BADQ92934 168 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 MAL2Q969L2 176 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 LIN37Q96GY3 246 aaPredicted RBP6.11□□□□□ -1.43
UPF2-201ENST00000356352 OR5B2Q96R09 309 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ALG8Q9BVK2 526 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 DPCDQ9BVM2 203 aaPredicted RBP6.11□□□□□ -1.43
UPF2-201ENST00000356352 GPR62Q9BZJ7 368 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 NKX2-4Q9H2Z4 354 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 SLA2Q9H6Q3 261 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ACAD8Q9UKU7 415 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 EDARQ9UNE0 448 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 TRAV18A0A075B6X5 111 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 C1orf196B1AJZ1 125 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 FAM72CH0Y354 149 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 TOR1AO14656 332 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 OLFM2O95897 454 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 CD79AP11912 226 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ATP1B3P54709 279 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 EMP2P54851 167 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ZNF92Q03936 586 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 MSMO1Q15800 293 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 PROX2Q3B8N5 592 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.11□□□□□ -1.43
UPF2-201ENST00000356352 FAM72AQ5TYM5 149 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 FAM72DQ6L9T8 149 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 KIAA1211LQ6NV74 962 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 C5orf46Q6UWT4 87 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 CFAP77Q6ZQR2 320 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 KCTD20Q7Z5Y7 419 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 TRIM73Q86UV7 250 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 FAM72BQ86X60 149 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 TMEM151AQ8N4L1 468 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 FNDC9Q8TBE3 224 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 TCTEX1D2Q8WW35 142 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 SORCS1Q8WY21 1168 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 DCUN1D4Q92564 292 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 APOOQ9BUR5 198 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ENKD1Q9H0I2 346 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 XYLT2Q9H1B5 865 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 PREBQ9HCU5 417 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 B4DXG7 233 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 SULT2B1O00204 365 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 EFNA3P52797 238 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 SELENOWP63302 87 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ACTBL2Q562R1 376 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 KRBOX4Q5JUW0 171 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 CPZQ66K79 652 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 ZNF529Q6P280 563 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 VWA5B2Q8N398 1253 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 BEST4Q8NFU0 473 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 OR6T1Q8NGN1 323 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 OR10T2Q8NGX3 314 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 TAAR8Q969N4 342 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 SGCZQ96LD1 299 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 SNX18Q96RF0 628 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 DPH2Q9BQC3 489 aaPredicted RBP6.11□□□□□ -1.43
UPF2-201ENST00000356352 OR51E2Q9H255 320 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 KCNK12Q9HB15 430 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 CPNE5Q9HCH3 593 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 HEBP1Q9NRV9 189 aa6.11□□□□□ -1.43
UPF2-201ENST00000356352 HEMK1Q9Y5R4 338 aaPredicted RBP6.11□□□□□ -1.43
UPF2-201ENST00000356352 ANKRD34BA5PLL1 514 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 P2RX6O15547 441 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 SLC10A3P09131 477 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 BMP2P12643 396 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 IL1RNP18510 177 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CPT2P23786 658 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CX3CR1P49238 355 aa6.1□□□□□ -1.43
UPF2-201ENST00000356352 CAV2P51636 162 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms