RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KDELR2P33947 212 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 CLDN2P57739 230 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 TUBA4AP68366 448 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 CD163Q86VB7 1156 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 A0A0G2JLL6 359 aaPredicted RBP16.35■□□□□ 0.21
COL27A1-201ENST00000356083 PRRT2Q7Z6L0 340 aaPredicted RBP16.35■□□□□ 0.21
COL27A1-201ENST00000356083 SLC5A8Q8N695 610 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 MYOTQ9UBF9 498 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 PIAS3Q9Y6X2 628 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 KLRC4O43908 158 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 OXSR1O95747 527 aaPredicted RBP16.35■□□□□ 0.21
COL27A1-201ENST00000356083 RPA2P15927 270 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 GRB2P62993 217 aaKnown RBP16.35■□□□□ 0.21
COL27A1-201ENST00000356083 GRM7Q14831 915 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 ACOT11Q8WXI4 607 aaPredicted RBP16.35■□□□□ 0.21
COL27A1-201ENST00000356083 LRR1Q96L50 414 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 IGSF9Q9P2J2 1179 aa16.35■□□□□ 0.21
COL27A1-201ENST00000356083 GJB5O95377 273 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 NTSR1P30989 418 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 XKR5Q6UX68 686 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 REEP6Q96HR9 211 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 RBM14Q96PK6 669 aaKnown RBP16.34■□□□□ 0.21
COL27A1-201ENST00000356083 CD320Q9NPF0 282 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 SRRDQ9UH36 339 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 KDM4EB2RXH2 506 aaPredicted RBP16.34■□□□□ 0.21
COL27A1-201ENST00000356083 BMXP51813 675 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 ZBED5Q49AG3 693 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 FIGLAQ6QHK4 219 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 FAM210AQ96ND0 272 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 SEC14L4Q9UDX3 406 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 EFSO43281 561 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 LDB3O75112 727 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 Q6ZSR6 202 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 YTHDF3Q7Z739 585 aaKnown RBP16.34■□□□□ 0.21
COL27A1-201ENST00000356083 TMEM150AQ86TG1 271 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 EID2Q8N6I1 236 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 NELL2Q99435 816 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 DNAJB4Q9UDY4 337 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 CADP27708 2225 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 OIP5O43482 229 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 TRAF3IP2O43734 574 aaPredicted RBP16.34■□□□□ 0.21
COL27A1-201ENST00000356083 DOK2O60496 412 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 ANHXE9PGG2 379 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 GABARAPH6UMI1 98 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 OR2T1O43869 369 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 GABARAPO95166 117 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 PROS1P07225 676 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 ZNF836Q6ZNA1 936 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 ZNF599Q96NL3 588 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 PHOX2BQ99453 314 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 TERTO14746 1132 aaKnown RBP16.34■□□□□ 0.21
COL27A1-201ENST00000356083 CD46P15529 392 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 HNRNPFP52597 415 aaKnown RBP16.34■□□□□ 0.21
COL27A1-201ENST00000356083 ACTC1P68032 377 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 ACTA1P68133 377 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 ZNF45Q02386 682 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 RPS26P11Q5JNZ5 115 aaPredicted RBP16.34■□□□□ 0.21
COL27A1-201ENST00000356083 STEAP2Q8NFT2 490 aa16.34■□□□□ 0.21
COL27A1-201ENST00000356083 A0A1W2PP18 115 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 EBLN1P0CF75 366 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 NCBP2-AS2Q69YL0 99 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 LINC00696Q6ZRV3 163 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 UBAC2Q8NBM4 344 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 PAQR8Q8TEZ7 354 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 HSD17B8Q92506 261 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 TMEM175Q9BSA9 504 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 NSG1A0A0A6YYJ2 146 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 C17orf105B2RV13 164 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 NFYBP25208 207 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 AFF3P51826 1226 aaKnown RBP16.33■□□□□ 0.21
COL27A1-201ENST00000356083 MRPS34P82930 218 aaKnown RBP16.33■□□□□ 0.21
COL27A1-201ENST00000356083 SHEQ5VZ18 495 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 TEX26Q8N6G2 289 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 SMG8Q8ND04 991 aaKnown RBP16.33■□□□□ 0.21
COL27A1-201ENST00000356083 C3orf58Q8NDZ4 430 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 OR4N2Q8NGD1 307 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 DZANK1Q9NVP4 752 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 DIP2BQ9P265 1576 aa16.33■□□□□ 0.21
COL27A1-201ENST00000356083 hCG_1809904A0A1W2PP81 198 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 A0A1W2PPE2 198 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 A0A1W2PR64 198 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 A0A1W2PRV1 198 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 HBQ1P09105 142 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 RPL13AP3Q6NVV1 102 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 CMIPQ8IY22 773 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 TRAPPC2LQ9UL33 140 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 TRAPPC2LH3BP13 241 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 SOCS6O14544 535 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 PCSK2P16519 638 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 OMGP23515 440 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 AKR1C1Q04828 323 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 INPP4AQ96PE3 977 aaPredicted RBP16.33■□□□□ 0.2
COL27A1-201ENST00000356083 APMAPQ9HDC9 416 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 AK6Q9Y3D8 172 aaKnown RBP16.33■□□□□ 0.2
COL27A1-201ENST00000356083 MADDQ8WXG6 1647 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 TACR3P29371 465 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 EMP2P54851 167 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 TUBA1BP68363 451 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 INCA1Q0VD86 236 aa16.33■□□□□ 0.2
COL27A1-201ENST00000356083 DOC2AQ14183 400 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms