RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 Q6ZVL8 140 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 CTU1Q7Z7A3 348 aaKnown RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 LRRC56Q8IYG6 542 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC19A3Q9BZV2 496 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 PCYT1BQ9Y5K3 369 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 CDHR4A6H8M9 788 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 MED6O75586 246 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 PSMB1P20618 241 aaKnown RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 HMGCLP35914 325 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 PRPS1P60891 318 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 PITX1P78337 314 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 PIN1Q13526 163 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 DCST2Q5T1A1 773 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 HMGN2P46Q86SG4 172 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC51BQ86UW2 128 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SLC7A6Q92536 515 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 PRRC1Q96M27 445 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SAP130Q9H0E3 1048 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 MCCC2Q9HCC0 563 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 HCRTR2O43614 444 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 PPP1R3DO95685 299 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 KNG1P01042 644 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 HAPLN1P10915 354 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 CD68P34810 354 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 CLDN10P78369 228 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 LRRC26Q2I0M4 334 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 PLK5Q496M5 336 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 CYB5D2Q8WUJ1 264 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 ACTRT3Q9BYD9 372 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 TCEAL2Q9H3H9 227 aaPredicted RBP12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 SAGE1Q9NXZ1 904 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 KIF25Q9UIL4 384 aa12.03□□□□□ -0.48
SYNCRIP-201ENST00000355238 KNDC1Q76NI1 1749 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 RIMS1Q86UR5 1692 aaKnown RBP12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 EFCAB7A8K855 629 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 FZD7O75084 574 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 C1QBP02746 253 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF84P51523 738 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 GPR17Q13304 367 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 NADSYN1Q6IA69 706 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 IDO2Q6ZQW0 420 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 C11orf54Q9H0W9 315 aaPredicted RBP12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 DNTTIP1Q9H147 329 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 A0A0U1RQF3 1178 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 TNFP01375 233 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 SERPINF1P36955 418 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 PRKCZQ05513 592 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 SMN1Q16637 294 aaKnown RBP12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 RBM23Q86U06 439 aaKnown RBP12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 TMEM175Q9BSA9 504 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 ZNF442Q9H7R0 627 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 METTL7AQ9H8H3 244 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 TMEM100Q9NV29 134 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 POLHQ9Y253 713 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 BOLA1Q9Y3E2 137 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 PCDHGA6Q9Y5G7 932 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 CSNK1G3Q9Y6M4 447 aa12.02□□□□□ -0.48
SYNCRIP-201ENST00000355238 PTBP1P26599 531 aaKnown RBP eCLIP12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF91Q05481 1191 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC6A19Q695T7 634 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF704Q6ZNC4 412 aaPredicted RBP12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 GLB1L2Q8IW92 636 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 NPWQ8N729 165 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 CLMPQ9H6B4 373 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 SMCO4Q9NRQ5 59 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 CNIH4Q9P003 139 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMEM98Q9Y2Y6 226 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 A0A1W2PRU2 124 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZDHHC11BP0C7U3 371 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 AKR1C2P52895 323 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 C18orf21Q32NC0 220 aaPredicted RBP12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 RPS26P11Q5JNZ5 115 aaPredicted RBP12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 CATSPEREQ5SY80 951 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMPRSS9Q7Z410 1059 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 HAS2Q92819 552 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 FIZ1Q96SL8 496 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 PLCXD1Q9NUJ7 323 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 KCNK6Q9Y257 313 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 ACOT8O14734 319 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 B3GALNT1O75752 331 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 GSRP00390 522 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 SDC1P18827 310 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 S100A11P31949 105 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 ZNF136P52737 540 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 SP3Q02447 781 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 HBMQ6B0K9 141 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 TMEM225Q6GV28 225 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 PDZD3Q86UT5 571 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 OR51D1Q8NGF3 324 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 ST7LQ8TDW4 575 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 SCARB1Q8WTV0 552 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 ACOT11Q8WXI4 607 aaPredicted RBP12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 SLC39A13Q96H72 371 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 DDX31Q9H8H2 851 aaKnown RBP12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 ADAM18Q9Y3Q7 739 aa12.02□□□□□ -0.49
SYNCRIP-201ENST00000355238 M0R3H8 397 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 ANKRD28O15084 1053 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 HOXC8P31273 242 aa12.01□□□□□ -0.49
SYNCRIP-201ENST00000355238 GJA5P36382 358 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms