RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 RNF186Q9NXI6 227 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 ABRACLQ9P1F3 81 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 ZNF222Q9UK12 451 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 DNMT3AQ9Y6K1 912 aaPredicted RBP10.67□□□□□ -0.7
CAPN9-202ENST00000354537 EEF1E1O43324 174 aaKnown RBP10.67□□□□□ -0.7
CAPN9-202ENST00000354537 HYAL3O43820 417 aaPredicted RBP10.67□□□□□ -0.7
CAPN9-202ENST00000354537 FZD7O75084 574 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 TSC22D2O75157 780 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 SC5DO75845 299 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 HMGN2P05204 90 aaKnown RBP10.67□□□□□ -0.7
CAPN9-202ENST00000354537 IFI30P13284 250 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 C4BPBP20851 252 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 TGM3Q08188 693 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 CAMK2DQ13557 499 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 CCDC85BQ15834 202 aaPredicted RBP10.67□□□□□ -0.7
CAPN9-202ENST00000354537 SPOUT1Q5T280 376 aaKnown RBP10.67□□□□□ -0.7
CAPN9-202ENST00000354537 OR8H3Q8N146 312 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 OR5AR1Q8NGP9 310 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 OR8K5Q8NH50 307 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 OR5W2Q8NH69 310 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 CLIP3Q96DZ5 547 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 ALG8Q9BVK2 526 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 C1QTNF2Q9BXJ5 285 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 TMEM168Q9H0V1 697 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 SLC38A1Q9H2H9 487 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 HINT3Q9NQE9 182 aaKnown RBP10.67□□□□□ -0.7
CAPN9-202ENST00000354537 NUDT15Q9NV35 164 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 ZNF624Q9P2J8 865 aaPredicted RBP10.67□□□□□ -0.7
CAPN9-202ENST00000354537 UBQLN2Q9UHD9 624 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 RASD1Q9Y272 281 aa10.67□□□□□ -0.7
CAPN9-202ENST00000354537 TRAV1-2A0A0B4J238 106 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 A0A0G2JK05 382 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 A0A1B0GTQ1 180 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 TMEM127O75204 238 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 FGF19O95750 216 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 MT-ND5P03915 603 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 PRNPP04156 253 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 LAG3P18627 525 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SNTA1Q13424 505 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SLC9A5Q14940 896 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 MFSD13AQ14CX5 517 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 NIPAL3Q6P499 406 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 CPOQ8IVL8 374 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 REM2Q8IYK8 340 aaPredicted RBP10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SIX5Q8N196 739 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 TOMM5Q8N4H5 51 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SIRT6Q8N6T7 355 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 HAVCR2Q8TDQ0 301 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 OTUB2Q96DC9 234 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 NXPE2Q96DL1 559 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 OR7D2Q96RA2 312 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 ABHD1Q96SE0 405 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 TIMP4Q99727 224 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 TDP1Q9NUW8 608 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 COL4A3Q01955 1670 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 PCNTO95613 3336 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 RPS10-NUDT3A0A1W2PQS6 291 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SPINT1O43278 529 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 OR7A10O76100 309 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 AGR2O95994 175 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 H2AFB2P0C5Z0 115 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SAGP10523 405 aaPredicted RBP10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SSR2P43308 183 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 MLLT1Q03111 559 aaPredicted RBP10.66□□□□□ -0.7
CAPN9-202ENST00000354537 INSL4Q14641 139 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 LASP1Q14847 261 aaKnown RBP10.66□□□□□ -0.7
CAPN9-202ENST00000354537 CEBPEQ15744 281 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 ZIC1Q15915 447 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 GSG1Q2KHT4 349 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 MRM1Q6IN84 353 aaKnown RBP10.66□□□□□ -0.7
CAPN9-202ENST00000354537 RPL13AP3Q6NVV1 102 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 WASH2PQ6VEQ5 465 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 PLEKHM3Q6ZWE6 761 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SZRD1Q7Z422 152 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 GDF7Q7Z4P5 450 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 ADGRD2Q7Z7M1 963 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 ADGRG3Q86Y34 549 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 FAM20CQ8IXL6 584 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 RNF113BQ8IZP6 322 aaKnown RBP10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SLC44A3Q8N4M1 653 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 MS4A15Q8N5U1 240 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 OR11H4Q8NGC9 324 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 OR56B4Q8NH76 319 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 ABHD4Q8TB40 342 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SLC2A12Q8TD20 617 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 GANCQ8TET4 914 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 WFIKKN2Q8TEU8 576 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 YIPF5Q969M3 257 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 OMA1Q96E52 524 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SLC41A3Q96GZ6 507 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 FCRL4Q96PJ5 515 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 C17orf62Q9BQA9 187 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 MENTQ9BUN1 341 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 ACAT2Q9BWD1 397 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 CACNG6Q9BXT2 260 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 UBQLN3Q9H347 655 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 ISG20L2Q9H9L3 353 aaKnown RBP10.66□□□□□ -0.7
CAPN9-202ENST00000354537 CTPS2Q9NRF8 586 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 CAMK2AQ9UQM7 478 aa10.66□□□□□ -0.7
CAPN9-202ENST00000354537 SIRT4Q9Y6E7 314 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms