RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 SLC27A4Q6P1M0 643 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 METAP1DQ6UB28 335 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 RRM2BQ7LG56 351 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 VRK2Q86Y07 508 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 TCTE3Q8IZS6 198 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 OR51L1Q8NGJ5 315 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SFXN5Q8TD22 340 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SMG7Q92540 1137 aaKnown RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 DIO2Q92813 273 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SPATA5L1Q9BVQ7 753 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 PRDM7Q9NQW5 492 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 PCDHGB7Q9Y5F8 929 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 TRBV23OR9-2A0A075B6M9 112 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 OTOL1A6NHN0 477 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 GNB5O14775 395 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SURF4O15260 269 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 LYRM1O43325 122 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 HRGP04196 525 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 CD3GP09693 182 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 TBXA2RP21731 343 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 TRHRP34981 398 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 WASP42768 502 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 EVX1P49640 407 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 RPS7P62081 194 aaKnown RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 FCN2Q15485 313 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 MLF2Q15773 248 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 FAM46CQ5VWP2 391 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 RSPRY1Q96DX4 576 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 DNAJA3Q96EY1 480 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 CNRIP1Q96F85 164 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 MS4A3Q96HJ5 214 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 CAPNS2Q96L46 248 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 TIMP4Q99727 224 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SARGQ9BW04 601 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 CHIAQ9BZP6 476 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 C6orf106Q9H6K1 298 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 SLA2Q9H6Q3 261 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SYNDIG1Q9H7V2 258 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 IL20Q9NYY1 176 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 PTGFRNQ9P2B2 879 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 EXTL2Q9UBQ6 330 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 NPIPA5A0A0B4J1W7 369 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 EDDM13A0A1B0GTR0 161 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 PRR19A6NJB7 356 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 NPIPA7E9PJI5 369 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SLC9A3R1O14745 358 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 PGRMC2O15173 223 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 NUPL2O15504 423 aaKnown RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 ARHGEF9O43307 516 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 PRICKLE3O43900 615 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 UBXN7O94888 489 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 ZIC2O95409 532 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 NPIPA8P0DM63 369 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 ZNF250P15622 560 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 GALP22466 123 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 ACVR1BP36896 505 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SLC1A3P43003 542 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 HCCSP53701 268 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 TAS2R38P59533 333 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 PPP3R1P63098 170 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 ID2Q02363 134 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 PRDX1Q06830 199 aaKnown RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 SLC3A1Q07837 685 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 MRPL28Q13084 256 aaKnown RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 ELAVL3Q14576 367 aaKnown RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 ZMYND11Q15326 602 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 EOGTQ5NDL2 527 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 PXDC1Q5TGL8 231 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 TIGD3Q6B0B8 471 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 ARL9Q6T311 187 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 OR4N5Q8IXE1 308 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 OR2A1Q8NGT9 310 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 ZNF296Q8WUU4 475 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 SPRYD4Q8WW59 207 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 AP3S1Q92572 193 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 UFD1Q92890 307 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SECISBP2Q96T21 854 aaKnown RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 TRAF4Q9BUZ4 470 aaPredicted RBP8.98□□□□□ -0.97
RPE-201ENST00000354506 HDAC8Q9BY41 377 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SLC38A1Q9H2H9 487 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 ANKRD19PQ9H560 264 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 SEMA4GQ9NTN9 838 aa8.98□□□□□ -0.97
RPE-201ENST00000354506 HEATR5BQ9P2D3 2071 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 A0A1W2PR48 441 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 INMT-MINDY4F8WBC2 141 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 SLC30A4O14863 429 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 HCN1O60741 890 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 FGBP02675 491 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 HMGN2P05204 90 aaKnown RBP8.97□□□□□ -0.97
RPE-201ENST00000354506 PTHLHP12272 177 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 CSF2RAP15509 400 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 OR3A3P47888 321 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 KHKP50053 298 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 NCBP2P52298 156 aaKnown RBP eCLIP8.97□□□□□ -0.971e-8■□□□□ 9.8
RPE-201ENST00000354506 TAS2R41P59536 307 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 CDK3Q00526 305 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 RPL6Q02878 288 aaKnown RBP8.97□□□□□ -0.97
RPE-201ENST00000354506 DSG2Q14126 1118 aa8.97□□□□□ -0.97
RPE-201ENST00000354506 ZNF267Q14586 743 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms