RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 HDAC2Q92769 488 aaKnown RBP12.85□□□□□ -0.35
SMC6-201ENST00000351948 MROQ9BYG7 248 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 YTHDF1Q9BYJ9 559 aaKnown RBP12.85□□□□□ -0.35
SMC6-201ENST00000351948 OR52A5Q9H2C5 316 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 ACAD8Q9UKU7 415 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 PLXNB2O15031 1838 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 LOC100509620A0A075B734 347 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 A0A1B0GW55 424 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 OR2W5A6NFC9 320 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 H0YAE9 185 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 PCDH17O14917 1159 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 DUX4L2P0CJ85 424 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 DUX4L3P0CJ86 424 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 DUX4L4P0CJ87 422 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 DUX4L5P0CJ88 424 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 DUX4L6P0CJ89 424 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 DUX4L7P0CJ90 424 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 C4BPBP20851 252 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 FAUP35544 74 aaKnown RBP12.85□□□□□ -0.35
SMC6-201ENST00000351948 OR7A5Q15622 319 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 LINC00696Q6ZRV3 163 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 CPOQ8IVL8 374 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 FAM217AQ8IXS0 508 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 ZNF440Q8IYI8 595 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 FAM174AQ8TBP5 190 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 DUX4Q9UBX2 424 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 PDCD5O14737 125 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 B4GAT1O43505 415 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 ADAP00813 363 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 ZNF43P17038 809 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 GM2AP17900 193 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 YBX1P67809 324 aaKnown RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 NKX3-2P78367 333 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 MVKQ03426 396 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 MRPL2Q5T653 305 aaKnown RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 MEDAGQ5VYS4 303 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 TCEAL6Q6IPX3 200 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 PAPD4Q6PIY7 484 aaKnown RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 GID4Q8IVV7 300 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 ZMYND19Q96E35 227 aaPredicted RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 SCN4AP35499 1836 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 LRIT2A6NDA9 550 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 WASHC1A8K0Z3 465 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 ZNF182P17025 639 aaPredicted RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 ENDOUP21128 410 aaKnown RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 KCNJ10P78508 379 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 WASH2PQ6VEQ5 465 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 CYHR1Q6ZMK1 362 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 LRRC17Q8N6Y2 441 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 RDH12Q96NR8 316 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 RBM24Q9BX46 236 aaKnown RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 PINK1Q9BXM7 581 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 TIGARQ9NQ88 270 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 FER1L6Q2WGJ9 1857 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 FAM183AA6NL82 134 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 SLC22A1O15245 554 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 ZFAND5O76080 213 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 CSTBP04080 98 aaKnown RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 ACPPP15309 386 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 TCN2P20062 427 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 SLC15A1P46059 708 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 SCN1BQ07699 218 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 Q6ZPB1 254 aaPredicted RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 RASSF6Q6ZTQ3 369 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 SDR9C7Q8NEX9 313 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 METTL2AQ96IZ6 378 aaKnown RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 CCDC115Q96NT0 180 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 PITX2Q99697 317 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 CPPED1Q9BRF8 314 aaPredicted RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 ACSS1Q9NUB1 689 aaPredicted RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 IER3IP1Q9Y5U9 82 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 PRKXP51817 358 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 PLP2Q04941 152 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 ENTPD8Q5MY95 495 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 ZNF595Q8IYB9 648 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 UBALD2Q8IYN6 164 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 FBXL6Q8N531 539 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 PNLDC1Q8NA58 520 aaKnown RBP12.84□□□□□ -0.35
SMC6-201ENST00000351948 EID2BQ96D98 161 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 ZNF583Q96ND8 569 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 DSN1Q9H410 356 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 SMOC1Q9H4F8 434 aa12.84□□□□□ -0.35
SMC6-201ENST00000351948 CD8B2A6NJW9 211 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 ZNF879B4DU55 563 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 OXSR1O95747 527 aaPredicted RBP12.83□□□□□ -0.35
SMC6-201ENST00000351948 CD8BP10966 210 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 BMP2P12643 396 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 GDF1P27539 372 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 ARRB2P32121 409 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 PDX1P52945 283 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 EPHA5P54756 1037 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 ERVK-25P63136 954 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 SRSF5Q13243 272 aaKnown RBP12.83□□□□□ -0.35
SMC6-201ENST00000351948 VWA2Q5GFL6 755 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 SLC16A11Q8NCK7 471 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 CAPSLQ8WWF8 208 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 NRG4Q8WWG1 115 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 AMDHD1Q96NU7 426 aa12.83□□□□□ -0.35
SMC6-201ENST00000351948 ELF4Q99607 663 aaPredicted RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms