RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 TOGARAM1Q9Y4F4 1720 aa5.61□□□□□ -1.51
RFC1-201ENST00000349703 H7C2Y5 167 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 SOCS2O14508 198 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 CIDEAO60543 219 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 MRPS14O60783 128 aaKnown RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 NDUFB4O95168 129 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 CLIC3O95833 236 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ITGB3P05106 788 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ZNF865P0CJ78 1059 aaPredicted RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 SLC2A3P11169 496 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 AHCYP23526 432 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 CDH5P33151 784 aaPredicted RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 PPP3CCP48454 512 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 SUCLG1P53597 346 aaKnown RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 B4GALNT1Q00973 533 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ITPK1Q13572 414 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 GK3PQ14409 553 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 BCL2A1Q16548 175 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 IMPG1Q17R60 797 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 PDZK1Q5T2W1 519 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 GCNT6Q5T4J0 391 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 SLC24A5Q71RS6 500 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ZNF540Q8NDQ6 660 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 CPEB3Q8NE35 698 aaKnown RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 JOSD2Q8TAC2 188 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 CIDECQ96AQ7 238 aaPredicted RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 TRMT61AQ96FX7 289 aaKnown RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 SIGLEC10Q96LC7 697 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ZNF285Q96NJ3 590 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 SORT1Q99523 831 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 NLGN3Q9NZ94 848 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 MLXQ9UH92 298 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ENPP5Q9UJA9 477 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 RNF11Q9Y3C5 154 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 TMEM178BH3BS89 294 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 LGI1O95970 557 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 POU3F2P20265 443 aaPredicted RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 OTX2P32243 289 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 SLC26A2P50443 739 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 DGCR6Q14129 220 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 DOC2BQ14184 412 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 HEPACAMQ14CZ8 416 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ATAD3CQ5T2N8 411 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ZNF470Q6ECI4 717 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 RTN4RL2Q86UN3 420 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 PAQR7Q86WK9 346 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 TRAPPC5Q8IUR0 188 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 LACC1Q8IV20 430 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 CLEC1AQ8NC01 280 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 C19orf18Q8NEA5 215 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 OR13F1Q8NGS4 319 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 UBA3Q8TBC4 463 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 MCOLN3Q8TDD5 553 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 SCARB1Q8WTV0 552 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ATL1Q8WXF7 558 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ACDQ96AP0 544 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 DUS3LQ96G46 650 aaKnown RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 RANBP9Q96S59 729 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 FIZ1Q96SL8 496 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ADAM2Q99965 735 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 SNRNP25Q9BV90 132 aaKnown RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 CNTNAP4Q9C0A0 1308 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 KCNN3Q9UGI6 736 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 RAI2Q9Y5P3 530 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 LINC01553A4QN01 128 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 EFCAB10A6NFE3 127 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 SERINC4A6NH21 518 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ARPC2O15144 300 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 SORBS2O94875 1100 aaKnown RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 ANGPTL1O95841 491 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 CST1P01037 141 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 TGFB1P01137 390 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 PRKACBP22694 351 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 G0S2P27469 103 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 MAT2AP31153 395 aaKnown RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 HERVK_113P63132 956 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 PDZD11Q5EBL8 140 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 C1orf220Q5T0J3 134 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 TMEM198Q66K66 360 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 LCN8Q6JVE9 175 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 SUSD1Q6UWL2 747 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 FRRS1Q6ZNA5 592 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 RBM23Q86U06 439 aaKnown RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 CATSPERDQ86XM0 798 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ELMOD2Q8IZ81 293 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 DAW1Q8N136 415 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 PTGR2Q8N8N7 351 aaPredicted RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 KDF1Q8NAX2 398 aaPredicted RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 MBD3L2Q8NHZ7 208 aaPredicted RBP5.6□□□□□ -1.51
RFC1-201ENST00000349703 C19orf60Q96EN9 201 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 OR5M11Q96RB7 305 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 MYADMQ96S97 322 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ERVK-6Q9BXR3 956 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 TM6SF2Q9BZW4 377 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ABCD2Q9UBJ2 740 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 MOB4Q9Y3A3 225 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 GMPPBQ9Y5P6 360 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 ATAD5Q96QE3 1844 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 A0A0A6YYJ9 748 aa5.6□□□□□ -1.51
RFC1-201ENST00000349703 F8W735 103 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms