RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 OR2T5Q6IEZ7 315 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 TTC9BQ8N6N2 239 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 OR2T29Q8NH02 315 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 MRGPRX2Q96LB1 330 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 NELL2Q99435 816 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 SFXN1Q9H9B4 322 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 PRDM9Q9NQV7 894 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 SLCO3A1Q9UIG8 710 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 MBD1Q9UIS9 605 aaPredicted RBP10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF840PA6NDX5 716 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 SLC31A2O15432 143 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 EBLN1P0CF75 366 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 CCR9P51686 369 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 RPS21P63220 83 aaKnown RBP10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 NTHL1P78549 312 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 CDK3Q00526 305 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 SLC10A2Q12908 348 aaPredicted RBP10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 DOC2AQ14183 400 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 LIX1LQ8IVB5 337 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 OR52N1Q8NH53 320 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 SIGLEC10Q96LC7 697 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 CAMK1GQ96NX5 476 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 SLC2A9Q9NRM0 540 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 DKKL1Q9UK85 242 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 FBXL4Q9UKA2 621 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 MN1Q10571 1320 aaPredicted RBP10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 STC2O76061 302 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 UGT2B10P36537 528 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 EXOSC2Q13868 293 aaKnown RBP10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 NPAS3Q8IXF0 933 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 C1orf74Q96LT6 269 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 TPSD1Q9BZJ3 242 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 A0A1W2PQU0 124 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 J3QLW9 94 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 TGM5O43548 720 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 LATO43561 262 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 TPOP07202 933 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 GLULP15104 373 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ARSBP15848 533 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF19P17023 458 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 FPR1P21462 350 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ETV6P41212 452 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 GIPRP48546 466 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ST3GAL4Q11206 333 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 HEPHL1Q6MZM0 1159 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ARL9Q6T311 187 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 TEX261Q6UWH6 196 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 S100A16Q96FQ6 103 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF778Q96MU6 729 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 FYTTD1Q96QD9 318 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 PTGDR2Q9Y5Y4 395 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 U3KQ87 197 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 SPEF2Q9C093 1822 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 HMGCLP35914 325 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 HTR3AP46098 478 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 TMEM151AQ8N4L1 468 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 KRTCAP2Q8N6L1 136 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 NECAB3Q96P71 396 aaPredicted RBP10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 POTEKPQ9BYX7 375 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 HAPLN2Q9GZV7 340 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 WASH4PA8MWX3 477 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 SEC14L2O76054 403 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 CRYZQ08257 329 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 RASGEF1BQ0VAM2 473 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 H3F3CQ6NXT2 135 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 SLC36A4Q6YBV0 504 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 TP53INP2Q8IXH6 220 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 TCTE3Q8IZS6 198 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 CCDC54Q8NEL0 328 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ZNF680Q8NEM1 530 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 TXN2Q99757 166 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 MEAF6Q9HAF1 191 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 RPH3ALQ9UNE2 315 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 GPR34Q9UPC5 381 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ATG4BQ9Y4P1 393 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 TRIM77I1YAP6 450 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 PIM1P11309 404 aaPredicted RBP10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 PGAM2P15259 253 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 NQO2P16083 231 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ACRV1P26436 265 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 TNFSF8P32971 234 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 PRKXP51817 358 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 HCCSP53701 268 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 KIAA1024LP59773 190 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 RAP2BP61225 183 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 CEACAM7Q14002 265 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 CLINT1Q14677 625 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 RAB41Q5JT25 222 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 PM20D1Q6GTS8 502 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 LURAP1LQ8IV03 231 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 FBXL6Q8N531 539 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 TCEANCQ8N8B7 351 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 LMO3Q8TAP4 145 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ELP5Q8TE02 316 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 SLC2A13Q96QE2 648 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 SAMD10Q9BYL1 202 aa10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 EXOSC1Q9Y3B2 195 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-202ENST00000348513 ACOD1A6NK06 481 aa10.5□□□□□ -0.73
SMARCE1-202ENST00000348513 HPGDSO60760 199 aa10.5□□□□□ -0.73
SMARCE1-202ENST00000348513 LGI1O95970 557 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms