RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 ILKQ13418 452 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 COL28A1Q2UY09 1125 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 AMZ1Q400G9 498 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 BEX5Q5H9J7 111 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 FAM219BQ5XKK7 198 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 GRHL2Q6ISB3 625 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 TMEM71Q6P5X7 295 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 FAM92BQ6ZTR7 304 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 TMPRSS11BQ86T26 416 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 PLXDC1Q8IUK5 500 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 AQP12AQ8IXF9 295 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 LINC00528Q8N1L1 170 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 PQLC1Q8N2U9 271 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 ZNF781Q8N8C0 355 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 BBS1Q8NFJ9 593 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 SNX33Q8WV41 574 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 RNF141Q8WVD5 230 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 LRFN5Q96NI6 719 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 PRAP1Q96NZ9 151 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 TGM7Q96PF1 710 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 KCNA7Q96RP8 456 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 LMF1Q96S06 567 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 CD180Q99467 661 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 PARD6GQ9BYG4 376 aaPredicted RBP4.81□□□□□ -1.64
VCAM1-202ENST00000347652 SEMA6CQ9H3T2 930 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 NT5DC2Q9H857 520 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 C1GALT1Q9NS00 363 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 ZNF275Q9NSD4 429 aaPredicted RBP4.81□□□□□ -1.64
VCAM1-202ENST00000347652 TMEM9Q9P0T7 183 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 ZNF490Q9ULM2 529 aaPredicted RBP4.81□□□□□ -1.64
VCAM1-202ENST00000347652 SNX7Q9UNH6 387 aa4.81□□□□□ -1.64
VCAM1-202ENST00000347652 TEX22C9J3V5 150 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 FOXE1O00358 373 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 TERTO14746 1132 aaKnown RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 AZIN1O14977 448 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 SHOX2O60902 331 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CPNE6O95741 557 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CAPN1P07384 714 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 YES1P07947 543 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 C1QTNF9P0C862 333 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CXCR2P25025 360 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ENTPD1P49961 510 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 RPL14P50914 215 aaKnown RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 GFERP55789 205 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 REEP5Q00765 189 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 RELAQ04206 551 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 AIMP2Q13155 320 aaKnown RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 MADCAM1Q13477 382 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 RAB39AQ14964 217 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 MST1LQ2TV78 715 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 UGT3A2Q3SY77 523 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PHYHD1Q5SRE7 291 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 FBXO42Q6P3S6 717 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 FIGLAQ6QHK4 219 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PAQR7Q86WK9 346 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CRLF3Q8IUI8 442 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 LAS2Q8IYD9 372 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ZNF248Q8NDW4 579 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 OR4D9Q8NGE8 314 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 MIB2Q96AX9 1013 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PRR11Q96HE9 360 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 MAP3K3Q99759 626 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CCT7Q99832 543 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 DPH7Q9BTV6 452 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 EFCAB11Q9BUY7 163 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 SLC29A3Q9BZD2 475 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PITHD1Q9GZP4 211 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 SPNS1Q9H2V7 528 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 GPN1Q9HCN4 374 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 KCMF1Q9P0J7 381 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 STX18Q9P2W9 335 aaKnown RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PILRAQ9UKJ1 303 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 USP24Q9UPU5 2620 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 EPG5Q9HCE0 2579 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 BOD1L1Q8NFC6 3051 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ANKRD11Q6UB99 2663 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 APC2O95996 2303 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 IGHV5-51A0A0C4DH38 117 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 FEZF1A0PJY2 475 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 GMNCA6NCL1 334 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 HELTA6NFD8 242 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 TLCD2A6NGC4 264 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 SRRM3A6NNA2 597 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ZNF195O14628 629 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 HAT1O14929 419 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 TOX3O15405 576 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 LCMT2O60294 686 aaKnown RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PRAMEF10O60809 474 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CLN5O75503 358 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PVRP15151 417 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 B4GALT1P15291 398 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ST6GAL1P15907 406 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 MAGP20916 626 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ARPC4P59998 168 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 MEF2AQ02078 507 aaPredicted RBP4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ZIC1Q15915 447 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 PAGE2BQ5JRK9 111 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 CLVS2Q5SYC1 327 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 DCST1Q5T197 706 aa4.8□□□□□ -1.64
VCAM1-202ENST00000347652 ZNF385CQ66K41 422 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms